Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1128 ATGGACTTCACAAGAATTATAATGGGATTCAAAAGGTGTTTTGAGGCCAATGAATTTGAGGATCTTCCTTTCAATAAGGCAAAACGTTTGGAATGCAATGATAAGTTGGTTTCATTTGTTGGTATTGATACTCCCAACAATGCTCCAGTGAAGCCTATTGCTTCAGGGAAAGATGAGGATGGCTTTTACAATATTCAATGGTATGATGCAATTGAACCAGAGACTGTCACTGGAGCCACACATACTGGTGAGAAGGACATCGAGACCAGTGGCCACTTCAGGAGCAGTTATAGTGAGGATGGTGCTGGTTCTGGGGCAACATCATTGTCTGCTTCTTTAGATTCATTTGAATTTGATTTTCCAGTGAAAGCAAGTGTTCCTTTGGATGATGCCTATCCAGTTCCTGATGGCTTCCCAAGAAAACAACTTCCTGTTGGACCAAATCATCAAGCCACTATTCCAGTCTGGAAAGGAAGAGGTACTGAGGTATTAGTGTTGACAGGCACCAATGATGTTGATGGCAATGAAGAAAAGTGGTTGGGGACTTCTGTAATCTCAATGCCCGACTCGAGCTTCTGTCCTTCAAAGATTCACAAGGATGAAGAAGGCAGAACAGAATGTACCTGTCTGGATCAATACTCCATCAGGTGCGTTCGACAGCATGTTCGGGAAAAACGTGAAAACTTAATGAAGACTCTTGGAAAGGAAGCGTTTATGAACTTGGGGTTTGGTGACATGGGAGAGGAGGTTGCACTCAAATGGAGTGAAGAAGAAGAAGATTTATTTCATGAAATTGTCTACACAAATCCTGCGACATTGGGTAGAAACTTTTGGCAGCAGTTGTCAGCTGCATTCCCTTCTCGAACTACAAAGGATATTGTCAGCTATTATTACAATGTCTTTATGCTTCGGAGAAGAGCTGCTCAGAACAGATCCAGATTTCTAAATGTTGACAGTGACGATGATGAATGTCCCACAAGCAATAATGTGGGCTTCTATGGTTTTGAAGTTTCAGAAGAAGACGACTCTGCCATTGAGTCTCCTGATGATCAACATGTCCATGTGGGAAACCAAGGTAATTATTCTGATGATGATGGTGAAGATGACAACAGCGACGATGGAACTGATGGCGATTTCATTGGTATTGATGGGTATGACAAGGGAAACATCACTGACTCTAACTCTCAGATTGAGAGCTTGTCTCAACCTGTTCAACAAATCAATGAGACTCGGGGGATTTCAGTTGGTTCAGGTGTTCAGGATGATTCTTGTGTGTCCTTTGAGTGTCAGATCAATATGGATGAGCCCTGTCCCCCACGTGGTGATCACAATGATGCTGGTCCTGCCTTACAAGCTGGTGGATTCAAATGTGATCACAGCCCACTCATACCTGGCATACTTGATTTCTCCAGTGATGGTTTGGAGCATGTTTATTTTTCCGAGCCCTGTGATGCTAAAGACTGGTACCCAGGGTACTCCGCAGGTCCAGCCTCCGATATCGACTTCTCAGCCACATCCAAATTAATTGAAGAGTTTCTGTGTCAAGTTACTCCAGATCGAAAGACTAAAAGCGACTGA 1578 0.4328 MDFTRIIMGFKRCFEANEFEDLPFNKAKRLECNDKLVSFVGIDTPNNAPVKPIASGKDEDGFYNIQWYDAIEPETVTGATHTGEKDIETSGHFRSSYSEDGAGSGATSLSASLDSFEFDFPVKASVPLDDAYPVPDGFPRKQLPVGPNHQATIPVWKGRGTEVLVLTGTNDVDGNEEKWLGTSVISMPDSSFCPSKIHKDEEGRTECTCLDQYSIRCVRQHVREKRENLMKTLGKEAFMNLGFGDMGEEVALKWSEEEEDLFHEIVYTNPATLGRNFWQQLSAAFPSRTTKDIVSYYYNVFMLRRRAAQNRSRFLNVDSDDDECPTSNNVGFYGFEVSEEDDSAIESPDDQHVHVGNQGNYSDDDGEDDNSDDGTDGDFIGIDGYDKGNITDSNSQIESLSQPVQQINETRGISVGSGVQDDSCVSFECQINMDEPCPPRGDHNDAGPALQAGGFKCDHSPLIPGILDFSSDGLEHVYFSEPCDAKDWYPGYSAGPASDIDFSATSKLIEEFLCQVTPDRKTKSD 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1128 525 MobiDBLite consensus disorder prediction 340 394 - -
Alju12g1128 525 SUPERFAMILY Homeodomain-like 253 301 IPR009057 -
Alju12g1128 525 ProSiteProfiles Myb-like domain profile. 253 301 IPR001005 -
Alju12g1128 525 Gene3D - 254 316 - -
Alju12g1128 525 PANTHER DNA BINDING PROTEIN 7 515 - -
Alju12g1128 525 Pfam Myb-like DNA-binding domain 253 300 IPR001005 -
Alju12g1128 525 CDD SANT 253 301 IPR001005 -
Alju12g1128 525 MobiDBLite consensus disorder prediction 362 376 - -
Alju12g1128 525 MobiDBLite consensus disorder prediction 80 99 - -
Alju12g1128 525 SMART sant 250 303 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1128 Alju-ChrAlju12 31943656 31945961 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju12g1128 Myb_DNA-binding 2.3e-06 CL0123