Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1116 ATGGCTTCGCAAATGGCGATCATTGGTCGGACGCGTTCTCTGATCAAAGCGCTTCAATCTAACTACGCTAACACTTCCGTGAAGACTATTACCACCTTCCCTTCCCTCTCTCAGGAGCCTCAACTCGCCGAATCTCCGGCAACGGCCGCCCCAATCCCACTTCCTCCCAATCCGGCCTCCGGTAGTCCTCTCTACAATGAGAATTGGCGCAGCCCAATTCCACCTTCTGCAACCCAGTCAGTGATCCCACTGGGGTTTCTTAATCTAGTACCCGGTCATCGCATCCAAACAATGGCTCAGACATTTGATGTGAAGAGCTTGATGGATCAGTTTGCTAATTGGATGGCCTCTCAGGAATGGGCTGCTATCAAAGAGTTGTTCGAGTATTGGGTTAAGTCATTGGACAAGAATGGGAAGCCGAATAAGCCTGATGTGAATTTGTATAATCATTACCTGAGAGCAAACTTGATGATTGGCTCTTCTGCTGGGGAGCTACTTGATTTGTTGGCTGGAATGGAGGATTTTGGTATCGCACCTAATACTGCTTCGTTCAATTTGGTGCTTAAAGCAATGTACCACGCCAAGGAGACTGAAGCTGCACAGAAGTTGCTGGAACGGATGCTGCTGATTGGAAATGAATGTCGCCCTGATAATGAATCATATGACTTGGTCATCGGAATGCTGTTTTTGACTGGCCAAATTGATACTGCATTGAAATATATAGATTTGGCTTTGAAATCAAGTTATATGTTGTCAATGAATGTGTTCTCAAATTGTGTAAATAGTTGTATCAACAAGGGTAGGCTGGATACTTTGGCAGCAATAATTGAAAAGTGCAAGACAATGGATCAGAACAAAGCTCTTTGCCCTCCATGGAATGTGTGCTACTTAATAGCTGAAACTGCAATGCATCAGGATAATAGCAAGCTAGCTTACTATGCCCTGGAGTTTATGGCTATGTGGATTGCAAGGGGTGAGAAGGCAAGACCGCCTGCATCGCTTTCTGTAGATGAAGGTTTACTTGTGTCAGCTCTAGCCACTGCAGGTAGGACCTATAGTTCTACTCTGCTAGATGCAGCATGGAGTATTTTGCGGCGTCAAAGAAAGGCTCCTAACCCTGAATCTTATCTCGCAAAGATAAATGCCCTTGCATCTATGGGGAACTTACAAAGGGCTTTTTCTACGCTGCATGACTTTGAGGTTGCTTATGGAGACTCCAGTGAAGAAACTGAAGAGATGTTCTCTCCCTTTACTTCTTTACATCCATTGGTTGTGGCATGCTCCAAAAAGGGATTTGAGACATTGGATTCTGTTTATTTTCAACTGGAAAGTTTGAGCCGAGCAGAGAATCCTTATAAATCTGTTGCTGCTCTAAACTGCATCATTTTAGGGTGTGCAAACATATGGGACCTTGATCGTGCATACCAAACCTTTGAAGCAATTGGATCCTCTTTTGGATTGACACCTGATATTCATTCATATAATGCGCTGATGCATGCATTTGGGAAGCTCAAAAAGACACATGAAGCAACTAAGGTGTTTGAGCACGTAGTGAGCTTGGGTGTAAAGCCTAATGCATTGTCATATTCTCTGCTCGTCAATGCCCACCTCATGAACCGAAATGTCAAAGACGCTCTAACTATAGTTGATGATATGATGGCTGCTGGATTTGAACCTACAAAAGAGACGCTAAAAAAGGTTCGAAGGCGATGCATTCGAGAGATGGACTATGACAGTGACGATAGAGTTCAGTCCATTGCCAAATCTCTGAACATTCGAATGGGTTCAGAAGCCCGTCGGGACATTCTATTCAATCTTGATTACAGCATGGATTATGCTTAA 1842 0.4403 MASQMAIIGRTRSLIKALQSNYANTSVKTITTFPSLSQEPQLAESPATAAPIPLPPNPASGSPLYNENWRSPIPPSATQSVIPLGFLNLVPGHRIQTMAQTFDVKSLMDQFANWMASQEWAAIKELFEYWVKSLDKNGKPNKPDVNLYNHYLRANLMIGSSAGELLDLLAGMEDFGIAPNTASFNLVLKAMYHAKETEAAQKLLERMLLIGNECRPDNESYDLVIGMLFLTGQIDTALKYIDLALKSSYMLSMNVFSNCVNSCINKGRLDTLAAIIEKCKTMDQNKALCPPWNVCYLIAETAMHQDNSKLAYYALEFMAMWIARGEKARPPASLSVDEGLLVSALATAGRTYSSTLLDAAWSILRRQRKAPNPESYLAKINALASMGNLQRAFSTLHDFEVAYGDSSEETEEMFSPFTSLHPLVVACSKKGFETLDSVYFQLESLSRAENPYKSVAALNCIILGCANIWDLDRAYQTFEAIGSSFGLTPDIHSYNALMHAFGKLKKTHEATKVFEHVVSLGVKPNALSYSLLVNAHLMNRNVKDALTIVDDMMAAGFEPTKETLKKVRRRCIREMDYDSDDRVQSIAKSLNIRMGSEARRDILFNLDYSMDYA 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1116 613 Pfam Pentatricopeptide repeat domain 142 191 IPR002885 -
Alju12g1116 613 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 525 559 IPR002885 -
Alju12g1116 613 Gene3D Tetratricopeptide repeat domain 306 599 IPR011990 GO:0005515
Alju12g1116 613 Pfam PPR repeat family 489 535 IPR002885 -
Alju12g1116 613 PANTHER OS07G0599000 PROTEIN 1 612 IPR044605 -
Alju12g1116 613 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 490 524 IPR002885 -
Alju12g1116 613 NCBIfam pentatricopeptide repeat 492 526 IPR002885 -
Alju12g1116 613 NCBIfam pentatricopeptide repeat 528 560 IPR002885 -
Alju12g1116 613 Gene3D Tetratricopeptide repeat domain 112 305 IPR011990 GO:0005515
Alju12g1116 613 MobiDBLite consensus disorder prediction 38 63 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1116 487 579 Glycosyltransferase AT1G05670 27.957 2.49e-08 55.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g1116 12 31849327 31852760 Alju12g1116 12 31849327 31852760 ECH