Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1086 ATGAGTGGAAATCATGTTGACTCACGCTGTATCTGCTTCGACTTTGCAACTATTCTGAAAAATCCTCTTCTCTCTCTCTCTCTCTCTCGCGTTCGCGTTCACTGTTCACTGTTCACTCTACGCTGCAATACGCCACTCACACGCTGGCATCCATCTATCAGCCAAGTTTACCGTTTCATTGCGCATCTAAGCCTTCAACCTGGGTTTGATTTCGTTGATCCTCTTGAAAAAAATTCTCTCTCAGGCATATACATTTTTTTCTGCATAGCTTCTGCAACTTTTTTAATTCACCTTTTACTAATGGAATCTTGGAGTTACGCCTCAGAAGAAAGAAGCTATTTGTTTTCAGATGAAATGGATTTCTCACTGGATGCTTATATGAGAAGTAGAAGAGCAATGGTTGAATGGGACAACAACAACAACAAAAACAACAACAATAAAGCTTCTTATATCTTTGAGAAAGATGGGTTTATTTCAGATAAAGAGGTAATTAAAAGCGTGGAGTTTGTGGACTTGGGGTTTCCAGATTTGTTCAGAAGGCCCGTTCATGGTGGTGGACAGCCACTTGAAGCATCAAACTATGAACATGACAGTGATTCTAGTAAGAAAGTTAATTCCTCTACTCATGTTATTGCTCTTAATTCACCTTTGGGAGAAGTAGAATCCGAGCCTACTAGGCACCCATGTTCTGTAGTTGAATCTAAGATTCATGATTCTTCACTGATTGATTTAAAGCTAGGGAGATTAGGAGATTGTAAAGATTCAAGTAGTGATAAGAATGACAATGAGGGGTTCACTTTTCAACCTATGTATACGTCATCACTTACGAAGAGAGCTCGCACTTCCAGCTTACCAACTCAAACACCTGTTTGTCAAGTTTATGGTTGTAACAAGGATCTTAGCTCCTCAAAAGAGTACCACAAAAGGCACAAAGTTTGTGATGTTCATTCCAAGACCGCCAAAGTTATTGTTAACGGCATTGAACAAAGGTTTTGTCAGCAGTGCAGCAGGTTCCATTTGCTAGCTGAGTTTGATGATGGCAAGCGCAGTTGTCGTAGACGCCTAGCCGGACACAATGAACGTCGAAGGAAGCCTCAGTTTGATTACATCTCTGGTAAACCACAGAAGATACTGCAGTCATGTCAAGGTACCAAATATTTTGGGGCTTCAATACAGAAGAGACCCCAGTTTGCCTTTCACGACGTGTTTCAAAGCGGCATTTTTTACTCGGGAAAGCATGAACAAAGCAATCAGATTGGACACATCAAGTTCGAAGACGAATCAACTTATAGTTCTCAATTTGCAGTACCCATCATAACAAATGGTCAAGAGTTATCCAGGGCCTCCAACTCCAGAAGTTGTGCTCTCTCTCTTCTGTCAGCTCAGTCACACGATCTAACACGCAACTCAGCTGGTTCCCTTATTTCTCAAGGCATCTGCGCGCAGCACAGTGATGATCAAGTTCCTGAAACACCTTTTGGGATAAGGTCTCTGGATAAATATGTCCCAAGTCAGTCCTTTTCGTGTGAGATAAACTCCATGGAAGTTGCTAAGAACAGACCCATAATGCCTTCTGATGTTGGTCATCATGCTCTTCAACTTGAAGTCCATGGAGATGGTGATACTAACAAACCATCAGATTCGTTAAATTCCAAACATCGTCCTCCTGTTGTTGAACATGGCTCCACCGTTGATCTGTTCCAATTGTCGTCACATCTTCAAAGGGTGGAGCAGCAGAGAAATTCTCTTCAAGTGAAGCACGAAAACGAGGACGGCTGCTTTTTTCCAACCATGTGA 1797 0.419 MSGNHVDSRCICFDFATILKNPLLSLSLSRVRVHCSLFTLRCNTPLTRWHPSISQVYRFIAHLSLQPGFDFVDPLEKNSLSGIYIFFCIASATFLIHLLLMESWSYASEERSYLFSDEMDFSLDAYMRSRRAMVEWDNNNNKNNNNKASYIFEKDGFISDKEVIKSVEFVDLGFPDLFRRPVHGGGQPLEASNYEHDSDSSKKVNSSTHVIALNSPLGEVESEPTRHPCSVVESKIHDSSLIDLKLGRLGDCKDSSSDKNDNEGFTFQPMYTSSLTKRARTSSLPTQTPVCQVYGCNKDLSSSKEYHKRHKVCDVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRRRLAGHNERRRKPQFDYISGKPQKILQSCQGTKYFGASIQKRPQFAFHDVFQSGIFYSGKHEQSNQIGHIKFEDESTYSSQFAVPIITNGQELSRASNSRSCALSLLSAQSHDLTRNSAGSLISQGICAQHSDDQVPETPFGIRSLDKYVPSQSFSCEINSMEVAKNRPIMPSDVGHHALQLEVHGDGDTNKPSDSLNSKHRPPVVEHGSTVDLFQLSSHLQRVEQQRNSLQVKHENEDGCFFPTM 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1086 598 Pfam SBP domain 291 364 IPR004333 GO:0003677
Alju12g1086 598 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 248 366 IPR044817 GO:0003677
Alju12g1086 598 FunFam Squamosa promoter-binding-like protein 14 282 352 - -
Alju12g1086 598 ProSiteProfiles Zinc finger SBP-type profile. 288 365 IPR004333 GO:0003677
Alju12g1086 598 MobiDBLite consensus disorder prediction 536 558 - -
Alju12g1086 598 SUPERFAMILY SBT domain 289 370 IPR036893 GO:0003677|GO:0005634
Alju12g1086 598 Gene3D - 282 352 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1086 Alju-ChrAlju12 31455245 31459435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1086 242 596 SBP-box Gene Family AT1G69170 38.398 7.08e-60 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Alju12g1086 SBP 4.2e-31 No_clan