Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1083 ATGGGAGCTCTTTGTTCTTGTTTCCGGGGCGCACGAGACGACGTCGCTTCAGAAGTTACTCCTTCTTCCTCCTCCTCAATACATTCAAATGCAAATACTACTATCGATCGTCATCAACATCATGCCGACCCAAGAGTTCTTCGATTCTTCCAAAGGTTCGGATCAAAATCTAATTCAGTTCGGCCAGAAGCTACTCAGACTCGCTCCATTGAAATAACTGATCAAGGAACAAGGGATTCATCAGGTCATCATTCTGATTCATCCGAAGAATGTCCTACATGTTTGGAATATTATACAGATGAAAATCCAAAGATAGAAACTGAATGCTCTCATCATTTTCACCTTCCCTGTATACTTGAATGGTATCAGAGAAGTGAGGAATGCCCCAACTGTAGACAGGTGCTTATCGTTAAAGGAGTAATTGGCGAATGGAGTGACCCCCTTTAA 447 0.4251 MGALCSCFRGARDDVASEVTPSSSSSIHSNANTTIDRHQHHADPRVLRFFQRFGSKSNSVRPEATQTRSIEITDQGTRDSSGHHSDSSEECPTCLEYYTDENPKIETECSHHFHLPCILEWYQRSEECPNCRQVLIVKGVIGEWSDPL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1083 148 ProSiteProfiles Zinc finger RING-type profile. 91 132 IPR001841 -
Alju12g1083 148 MobiDBLite consensus disorder prediction 57 76 - -
Alju12g1083 148 MobiDBLite consensus disorder prediction 57 91 - -
Alju12g1083 148 SUPERFAMILY RING/U-box 85 138 - -
Alju12g1083 148 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 50 136 IPR013083 -
Alju12g1083 148 SMART ring_2 91 131 IPR001841 -
Alju12g1083 148 MobiDBLite consensus disorder prediction 18 39 - -
Alju12g1083 148 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 22 138 - -
Alju12g1083 148 MobiDBLite consensus disorder prediction 18 33 - -
Alju12g1083 148 Pfam Ring finger domain 90 132 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1083 Alju-ChrAlju12 31405068 31407750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1083 66 135 C3H Transcription Factor Family AT5G15790 51.429 5.09e-19 78.2