Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1039 ATGGTTCCAAGTGACATCAGAGGGTTTCACTATCCAGCACCTGAAAACCCCATCTTAGTTTCTCCAAACTTTGGCTTGTTTCGACAAGGTGATATCCAAAACCAGCTTCACCTGAACACCCTCTTGAGCAATTTGCCAAACTGCTACTTCCCTTCTGGTTCGGGAAGCCTCGAGTTTATCCCTCCTCTTCCACCTACTTCTTCAAGCTGCCTCAGCAGCAACTCAACTTCTGATGAAGCTGATGAGATTCAGCTCAACATTATTGATGAAAGGAGGCAAAGACGAATGATATCGAATCGAGAATCGGCTAGGAGGTCCAGGATGAGGAAGCAGAAGCACTTGGATGAACTGTGGTCACAGGTGGTGAGGCTCAGGAATGAGAACCACAATCTCATTGACAAACTGAACCATGTGTCTGAGTCACATGATAGAGTTCTTCAGGAGAATGCACGCCTCAAGGAAGAAGCTTCTGATCTTCGTCAACTGCTCGCGGACCTGAAAATTAGCTCTTCTTTTGCTGACATCATGAGAGATTTTGATGAACTCAGAGCTGAGCTCTCAAACTAA 567 0.4586 MVPSDIRGFHYPAPENPILVSPNFGLFRQGDIQNQLHLNTLLSNLPNCYFPSGSGSLEFIPPLPPTSSSCLSSNSTSDEADEIQLNIIDERRQRRMISNRESARRSRMRKQKHLDELWSQVVRLRNENHNLIDKLNHVSESHDRVLQENARLKEEASDLRQLLADLKISSSFADIMRDFDELRAELSN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1039 188 CDD bZIP_plant_GBF1 92 143 IPR045314 GO:0003700|GO:0006355
Alju12g1039 188 Gene3D - 89 144 - -
Alju12g1039 188 SMART brlzneu 87 151 IPR004827 GO:0003700|GO:0006355
Alju12g1039 188 FunFam BZIP transcription factor 89 140 - -
Alju12g1039 188 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 94 109 IPR004827 GO:0003700|GO:0006355
Alju12g1039 188 Pfam bZIP transcription factor 91 149 IPR004827 GO:0003700|GO:0006355
Alju12g1039 188 Coils Coil 135 169 - -
Alju12g1039 188 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 32 173 IPR044521 -
Alju12g1039 188 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 89 152 IPR004827 GO:0003700|GO:0006355
Alju12g1039 188 SUPERFAMILY Leucine zipper domain 91 141 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1039 Alju-ChrAlju12 30690583 30691149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1039 65 173 bZIP Transcription Factor Family AT3G30530 69.369 6.35e-47 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju12g1039 bZIP_1 2.3e-13 CL0018