Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1027 ATGGAAAAGAAGGGAGGAGAAATGGGTTTCTTTTGTTTAGCTCTGTTCTTCTCCTTGTGGGGTTCTGTTTCTGGTTTGCTTTCTCCTAAAGGTGTGAACTTTGAAGTGCAAGCTCTAATGGGGATTAAAGCCTCTTTGGTGGATCCTCATAGTGCCCTTTATAACTGGGATGGTGATGCTGTGGATCCTTGTAGCTGGGCTATGGTCACTTGTTCTTCTGATCATTTTGTCATTGCCCTTGGAATTCCAAGCCAGAATATATCTGGGACTTTATCTCCAAGCATTGGAAACTTGACAAATCTACAGACGGTGCTCTTGCAAGATAACAATATATCAGGACCTATTCCTTTTGAGTTGGGGAGGCTCCAAAAACTTGAAACTCTTGATCTTTCTGATAATTCTTTTTCTGGTCAACTTCCTCATAGTTTTTCTCAAATGAAGAGCCTTCATTACCTGCGGCTGAATAATAACAGTCTCACTGGAGAAATTCCATCTTCTTTGGCTAATATGACGCAGCTTGCTTTTCTGGATATTTCTTATAATAACTTGAGCGGATCAGTACCTACAATAAATGCAACAACATTCAATATTGTAGGCAATCCCCAGATATGTGTTACTGGAACTGAGCAAAACTGCTTTAGAACTTCTGTACTTTCTTCTTCCTTGAATATTTCTCAAGATTTACAGTCCTCTGGTAGACCTAAACACCACAAAGTTGCTTTGGCATTTGCTTCAAGCATAAGCTGCATCTGCCTACTAATTGTTGGGTTTGGTTTCGTCCTATGGTGGAGACAAAGATATAACAAGCAAATCTTCTTTGATGTTAGTGAACAATACCGTGAAGAAATTTGCCTTGGAAACCTCAAGAAATTCAATTTCAGAGAGCTTCAGGCTGCTACAAATAACTTCAGCAGCAAGAACTTGATTGGCAAAGGTGGATTTGGGAATGTGTACAAAGGGTACCTCCCTGATGGTACAATTATAGCTGTGAAGAGGCTAAAAGATGGTAATGCCGTTGGAGGTGAGATCCAATTTCAGACTGAAGTCGAGATGATTAGCTTAGCCGTGCACCGGAATCTCCTTCGCCTCTATGGATTTTGTATGACAGCTACTGAAAGACTCTTGGTTTATCCGTACATGTCCAATGGCAGTGTTGCTTCCCGTCTTAAAGCCAAGCCTGTTCTTGATTGGGGAACAAGAAAGAGGATAGCCTTAGGAGCTGCAAGGGGATTGCTATATTTGCATGAGCAGTGTGACCCAAAGATCATTCACAGGGATGTGAAGGCTGCAAATATCTTGCTTGATGATGATTGTGAGGCTGTGGTGGGCGATTTCGGGTTAGCGAAGCTTTTGGATCACCATGATTCTCATGTTACAACAGCTGTGAGAGGAACTGTTGGGCATATAGCCCCAGAATATCTCTCAACAGGCCAGTCCTCTGAGAAAACAGATGTGTTTGGCTTTGGAATCCTCCTCCTTGAACTAATCTCAGGCCAGAGAGCTCTTGAATTCGGAAAAGCAGTAAACCAGAGAGGAGCTGTTCTTGACTGGGTGAAGAAGATTCATCAGGAGAAGAAGCTTGACTTGTTAGTTGACAGGGATCTGAAAAATAACTATGATAAGATTGAACTTGAAGAAATAGTTCAAGTGGCTCTTTTATGTACTCAGTATCTTCCAAGTCATAGACCAAAGATGTCTGAGGTGGTTAGGATGCTTGAAGGAGATGGACTTGCAGAGAAATGGGAAGCCACACAGAGAGCAGAATCAACAAGAAGCAGAGGAAATGAACTCTCTTCTTCAGAGAGATACTCTGATCTTACTGATGACTCTTCATTGCTTGCACAAGCTATGGAACTTTCTGGACCAAGGTGA 1872 0.4199 MEKKGGEMGFFCLALFFSLWGSVSGLLSPKGVNFEVQALMGIKASLVDPHSALYNWDGDAVDPCSWAMVTCSSDHFVIALGIPSQNISGTLSPSIGNLTNLQTVLLQDNNISGPIPFELGRLQKLETLDLSDNSFSGQLPHSFSQMKSLHYLRLNNNSLTGEIPSSLANMTQLAFLDISYNNLSGSVPTINATTFNIVGNPQICVTGTEQNCFRTSVLSSSLNISQDLQSSGRPKHHKVALAFASSISCICLLIVGFGFVLWWRQRYNKQIFFDVSEQYREEICLGNLKKFNFRELQAATNNFSSKNLIGKGGFGNVYKGYLPDGTIIAVKRLKDGNAVGGEIQFQTEVEMISLAVHRNLLRLYGFCMTATERLLVYPYMSNGSVASRLKAKPVLDWGTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDDCEAVVGDFGLAKLLDHHDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAVNQRGAVLDWVKKIHQEKKLDLLVDRDLKNNYDKIELEEIVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAEKWEATQRAESTRSRGNELSSSERYSDLTDDSSLLAQAMELSGPR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1027 623 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 17 583 - -
Alju12g1027 623 SMART serkin_6 303 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1027 623 Gene3D Transferase(Phosphotransferase) domain 1 380 592 - -
Alju12g1027 623 MobiDBLite consensus disorder prediction 590 614 - -
Alju12g1027 623 SUPERFAMILY Protein kinase-like (PK-like) 282 573 IPR011009 -
Alju12g1027 623 Gene3D Phosphorylase Kinase; domain 1 272 379 - -
Alju12g1027 623 SUPERFAMILY L domain-like 35 200 - -
Alju12g1027 623 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Alju12g1027 623 FunFam Putative LRR receptor-like serine/threonine-protein kinase 32 214 - -
Alju12g1027 623 MobiDBLite consensus disorder prediction 582 623 - -
Alju12g1027 623 FunFam Somatic embryogenesis receptor kinase 1 272 379 - -
Alju12g1027 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Alju12g1027 623 Pfam Leucine rich repeat 124 183 IPR001611 GO:0005515
Alju12g1027 623 FunFam Somatic embryogenesis receptor-like kinase 1 380 592 - -
Alju12g1027 623 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Alju12g1027 623 ProSiteProfiles Protein kinase domain profile. 303 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g1027 623 Gene3D Ribonuclease Inhibitor 32 214 IPR032675 -
Alju12g1027 623 Pfam Protein kinase domain 304 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1027 Alju-ChrAlju12 30501621 30505007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1027 10 623 Receptor kinase-like Gene Family AT5G16000 74.038 0.0 939
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Alju12g1027 Pkinase 1.1e-43 CL0016