Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1019 ATGAGGGAAGAAAGAAGAAGAAGAAAGCTACATCTCAGCAAGATCTATTCATTCACATGTGGCAGATCATCATTAAAAGAGGATTATTCAAATATTGGAGGAAGAGGATATTCCAGGGTTGTCTTTTGCAATGAACCAAATGCTCCTGAGGCTGTAATTCAGAATTATTCTGATAATTCTGTCAGTTCTACAAAATACACTCTTGCTACTTTCTTGCCCAAGTCACTGTTTGAACAGTTTAGGAGAGTGGCTAATTTTTATTTTTTAGTCACTGGTGTTTTATCCTTCACCGAACTTGCACCCTATTCTGCTGTTAGTGCTATCATTCCTCTGATAATTGTTATTGGTGCAACCATGGTGAAAGAAGGTATTGAAGATTGGCGTCGCAAAAAGCAGGATATTGAGGTGAACAATAGAAAAGTTAAAGTTCATAAAGGTGATGGTGTTTTTGAGCATACCGAGTGGAAGAATCTGAAGGTAGGGGATATAGTGAAGGTGGAGAAAGATGAATTCTTTCCAGCAGACCTTCTATTGCTTTCATCTAGCTATGAAGATGCTGTCTGTTATGTTGAGACCATGAATTTGGATGGAGAGACAAATTTGAAGTTGAAACAAGGATTGGAGGTAACTTCTTACTTACAAGAGGATCTTAATTTCAAGGATTTCAAAGGGACAGTAAAATGTGAAGATCCAAATGCAAATTTGTACTCTTTTATTGGTAACTTGGATTTTCAGGAGCATCAATATCCTCTTTCTCCTCAGCAACTTCTTTTGAGAGACTCTAAACTCCGTAATACGTCCTATATATTTGGAGCTGTCATTTTCACTGGTCATGACACTAAAGTAATACAAAATTCTACTGCTCCCCCTTCAAAGAGAAGCAGAATTGAGAAGAAGATGGACAAAGTCATATATTTCATGTTCTGTCTTCTGTTGCTATTGTCATCTGTTGGATCCATTGTCTTTGGCATCACAACAAAAGATGATTTAAAGAATGGGTTGATGAAAAGGTGGTATCTAAGACCAGATAGTTCTAGAATTTTCTTCGATCCTAAAAGATCAGCAGCAGCTGCAGTATATCATTCCTTGACTGCTTTAATGTTGTATAGCTACTTTATTCCAATCTCCTTGTATGTGTCAATAGAAATTGTGAAAGTCCTTCAGAGCATCTTCATCAATCAAGATATCCATATGTATTATGAAGAAGCAGACAAACCTGCTCATGCCCGTACTTCGAACTTGAATGAAGAACTTGGCCAAGTTGACACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAACTCAATGGAGTTCATTAAATTTTCGGTTGCCGGGGTGGCTTATGGACGTGGTGTTACAGAGGTTGAGAGGGCTATGGGTAGAAGAAAAGGCTCGCCTTTGATACATGAACAGGATAATGGTATAGAATTAGATGAGATCAGGGATTCTAATGCCAAATCACCCATCAAAGGTTTTAATTTTTCAGATGAAAGGATAATGAATGGCAACTGGGTGAATGAGCCAAAAGCTGATGTTATCCAAAAGTTTTTTCGCTTACTGGCAATCTGTCATACAGCAATACCTGAAGTGGATGAAGACACGAGAAAAGTCTCATATGAGGCTGAATCTCCAGATGAAGCAGCATTTGTTATTGCAGCCAGAGAACTTGGCTTTGAGTTCTACAAAAGGACTCAGACTAGTTTGTCAATTCATGAGTTGGATCTAATTTCTGGCAAGAAAGTTGAAAGGGTCTACAAACTTCTTGATGTTTTAGAGTTTAATAGTGCAAGGAAGCGAATGTCAGTGATAGTGAAAGATGAAGATGGAAAAATTTTGCTACTCAGTAAAGGCGCTGACAGTGTCATGTTTGAAAGACTTGCCAAGAATGGGAGAGAGTTTGAAGAGAAAACCATGAAGCATGTGCATGAATATGCCGATGCAGGCCTTAGGACCCTTATACTAGCCTATCGTGAACTAGATGAAGAAGAATATAAGGAGTTTGATAAGAAATTGTCTGAAGCCAAAAACTCAGTCAGTGCAGATCAAGAAACACTTATTGCTGAAGCATCTGATAAAGTTGAGAGGGATTTAATCCTCCTTGGTGCCACTGCAGTAGAGGACAAACTCCAGAATGGGGTTCCTGATTGCATTGACAAGCTTGCTCAAGCAGGAATTAAAATTTGGGTTTTGACTGGGGATAAAATGGAGACTGCCATCAATATTGGTTTTGCATGTAGTTTACTTAGACAAGGAATGAAGCAGATTATCATTCATCTGGATACTCCAGAAATTCAAGCATTGGAGAAGGCGGGAGACAAAATTGCCATTGCCAAGGCATCAAGAGAAAGTGTCCGCCGTCAGATAACTGAAGGCACTGCTCAGCTTGCTGCATCCAGTGGAACCTCTGAGCAAGCATTTGCACTGATTATTGATGGAAAATCACTTGTTTATGCTCTAGGCGATACAATGAAGAACATGTTTCTGGACCTTGCAATTAGTTGCGCATCTGTTATCTGCTGTCGCTCCTCACCTAAGCAGAAAGCTCTGGTCACTAGACTGGTTAAATCTGGAACTGGAAAAACCACATTAGCTATTGGTGATGGAGCCAATGATGTGGGGATGCTTCAAGAGGCAGATATAGGGATTGGAATAAGTGGTGTTGAAGGAATGCAGGCTGTTATGTCTAGTGATGTTGCAATTGCACAGTTCAGATATTTGGAAAGGTTACTACTTGTGCATGGGCATTGGTGTTATAGAAGGATATCATTGATGATATGTTACTTTTTCTACAAGAACATCACGTTTGGCTTCACTCTATTCTTGTATGAGGTGTATGCTTCATTCTCTGGACAACCTGCATACAATGACTGGTTTTTGTCTCTCTATAATGTCTTCTTCTCTTCACTTCCCGTGATCGCCCTCGGCGTATTCGACCAAGATGTCTCTGCCCGGTACTGCCTTAAGTTTCCTTTGCTGTATCAAGAAGGAGTGCAGAATGTGCTCTTCAGTTGGCGCCGTATATTCAGTTGGATGCTAAATGGATTCGTCAGCGCCATAATAATCTTCTTCTTCTCGACGAAGGCGATGGAGCTTCAGGCATTTGACAAGGAAGGAAGAACAGCAGGGAGAGACATCCTAGGAGCAACAATGTACACGTGTGTTGTCTGGGTTGTGAACTTGCAAATGGCACTTGCCATAAACTACTTCACATTGATACAACATATCTTCATCTGGGGTTCCATTACTTTTTGGTATATCTTCCTCATGATATATGGAGCAATAAGGCCTTCATTCTCCACAAATGCTTACAAAGTCTTCCTCGAAACTCTCGCCCCCACGCCTTCCTTCTGGCTCGTCACGTTCTTCGTGGTGATCTCGACTCTCACTCCATATTTCTCTTGCTCAGCTGTTCAGATGAGGTTCTTCCCTTTGTATCATGAAATGGTCCAGTGGATGAGGCAAGAAGGGAAGACCAATGATCCTGAGTATTGTGACATGGTGAGGCAGAGATCATTGAGGCCCACAACCGTGGGGTCCACAGCTCGTGTAGCAGCTAGAAACAGAAGTGTTGCCCATAGATGA 3585 0.4075 MREERRRRKLHLSKIYSFTCGRSSLKEDYSNIGGRGYSRVVFCNEPNAPEAVIQNYSDNSVSSTKYTLATFLPKSLFEQFRRVANFYFLVTGVLSFTELAPYSAVSAIIPLIIVIGATMVKEGIEDWRRKKQDIEVNNRKVKVHKGDGVFEHTEWKNLKVGDIVKVEKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTSYLQEDLNFKDFKGTVKCEDPNANLYSFIGNLDFQEHQYPLSPQQLLLRDSKLRNTSYIFGAVIFTGHDTKVIQNSTAPPSKRSRIEKKMDKVIYFMFCLLLLLSSVGSIVFGITTKDDLKNGLMKRWYLRPDSSRIFFDPKRSAAAAVYHSLTALMLYSYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKFSVAGVAYGRGVTEVERAMGRRKGSPLIHEQDNGIELDEIRDSNAKSPIKGFNFSDERIMNGNWVNEPKADVIQKFFRLLAICHTAIPEVDEDTRKVSYEAESPDEAAFVIAARELGFEFYKRTQTSLSIHELDLISGKKVERVYKLLDVLEFNSARKRMSVIVKDEDGKILLLSKGADSVMFERLAKNGREFEEKTMKHVHEYADAGLRTLILAYRELDEEEYKEFDKKLSEAKNSVSADQETLIAEASDKVERDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIHLDTPEIQALEKAGDKIAIAKASRESVRRQITEGTAQLAASSGTSEQAFALIIDGKSLVYALGDTMKNMFLDLAISCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDVAIAQFRYLERLLLVHGHWCYRRISLMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRIFSWMLNGFVSAIIIFFFSTKAMELQAFDKEGRTAGRDILGATMYTCVVWVVNLQMALAINYFTLIQHIFIWGSITFWYIFLMIYGAIRPSFSTNAYKVFLETLAPTPSFWLVTFFVVISTLTPYFSCSAVQMRFFPLYHEMVQWMRQEGKTNDPEYCDMVRQRSLRPTTVGSTARVAARNRSVAHR 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1019 1194 NCBIfam phospholipid-translocating P-type ATPase 56 1151 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Alju12g1019 1194 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 40 1157 - -
Alju12g1019 1194 Gene3D - 702 906 IPR023214 -
Alju12g1019 1194 SUPERFAMILY Calcium ATPase, transduction domain A 140 284 IPR008250 -
Alju12g1019 1194 Gene3D - 546 701 IPR023299 GO:0000166
Alju12g1019 1194 NCBIfam HAD-IC family P-type ATPase 833 948 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju12g1019 1194 SUPERFAMILY Calcium ATPase, transmembrane domain M 50 1143 IPR023298 -
Alju12g1019 1194 SFLD C1.7: P-type atpase like 407 917 - -
Alju12g1019 1194 Pfam Phospholipid-translocating P-type ATPase C-terminal 894 1144 IPR032630 -
Alju12g1019 1194 FunFam Phospholipid-transporting ATPase 701 906 - -
Alju12g1019 1194 Gene3D - 117 287 - -
Alju12g1019 1194 Coils Coil 658 678 - -
Alju12g1019 1194 SUPERFAMILY HAD-like 420 921 IPR036412 -
Alju12g1019 1194 FunFam Phospholipid-transporting ATPase 117 287 - -
Alju12g1019 1194 Pfam Phospholipid-translocating ATPase N-terminal 42 108 IPR032631 -
Alju12g1019 1194 PRINTS P-type cation-transporting ATPase superfamily signature 425 439 - -
Alju12g1019 1194 PRINTS P-type cation-transporting ATPase superfamily signature 866 885 - -
Alju12g1019 1194 SFLD p-type atpase 407 917 IPR044492 -
Alju12g1019 1194 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 500 702 IPR023299 GO:0000166
Alju12g1019 1194 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
Alju12g1019 1194 Pfam Cation transport ATPase (P-type) 534 627 - -
Alju12g1019 1194 CDD P-type_ATPase_APLT_Dnf-like 58 1026 - -
Alju12g1019 1194 FunFam Phospholipid-transporting ATPase 543 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1019 Alju-ChrAlju12 30436017 30442187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1019 10 1191 Primary Pumps ATPases AT1G68710 75.868 0.0 1945