Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1013 ATGCCCCCTGAGCAAGAAACCACTACTGTTCAAATGATGCCTAGCATTCCGGCCGTCCCAAACCGGCCGCCGCCGGAGAATGGCTCCGTTCATGCCGACCCAGGAGGTTCCGCCGCTATCAACGACAAGCCGAGTTCGGATAATTATGGCATTCCCTCAACACGTTCGGTTCTTCATCACCAATCCTTGCGACCTGTTACCCTCAAATTTGAGGACGTTTCTTACAGTATAACCTTTGAGAGCAAAAAGAATGGAGGGTTTTTTTCATCGGGAAACCCGAAACCGACCCGGAAGATTCTCAATGGCGTGATGGGGATAGTCCGGCCAGGGGAATTGATGGCAATGCTGGGCCCATCAGGCAGCGGAAAGACCACGCTACTCACGGCGCTAGCCGGCCGGCTAGCCGGAAAATTCACCGGCAACATAACATACAATGGCCTTCCTTTTTCTAGCTCAATGAAGCGCAAGACTGGTTTTGTGTCACAAGACGATGTGTTATACCCTCACCTCACTGTCCTTGAGACTCTGGTTTTTACAGCTTTGTTAAGACTTCCCAAAAGTATCACCAAAGAAGAGAAAGTAGAACAAGCCGAGATCGTCATCACGGAGCTCGGGTTAACCCGGTGCCGAAACACCGCCGTGGGTGGCGGTGCCTCCTTGTTCCGGGGAATTTCGGGCGGGGAGCGAAAGCGGGTCAGTATCGGGCAGGAAATGCTAGTGAACCCGAGTTTGTTGTTGCTGGATGAACCCACCTCCGGCCTGGACTCGACGGCAGCTCAACGCATAGTGGCGGTGCTCCGGGGATTGGCACGCCGTGGCCAGACGGTGTTGACCACTATTCATCAGCCGTCAAGCCGGTTGTACAGGATGTTCGATAAGGTGATTGTACTATCAGACGGGTGCCCGATTTATGCTGGACAATCGGGTCGGGTTATGGAATATCTTGAGTCCATCGGGTATCCGCCTACTGTCAACTTTATGAACCCCGCAGATTTTCTGCTTGACCTTGCTAATGGCATTGTGGATGATGTTAAGCTGGATGATCAGACTGATATGAATGGAAGATTAGATCACATTGAAGATCAAGCTTCAATAAAACAATCTCTATTTTTATCCTATAAAAAGATTTTATATCCTGCTCTGAAACAAGAGGTTCAGCTAAACAATGAAGGCAGAGATGGTTCACCCAGAAGCTCAGATAAGCAGTGGAACACAAGCTGGTGGGCGCAATTTAGGGTTTTGCTTAAGAGAGGTTTACTGGAGAGGAGACATGAATCTTATTCAGGCTTAAAGATTTTCCAAGTCTTATCAGTCTCAATCCTCTCAGGACTTCTCTGGTGGCATTCCGATCCCTCACACATACAAGATCAGGTAGGCCTGCTCTTCTTCTTCTCCATCTTCTGGGGATTCTTCCCACTATTCAACGCGATCTTCGCATTCCCATTGGAGAGGCCATTGCTGATAAAAGAAAGATCCTCAGGAATGTACCATCTTTCATCCTACTACATAGCCAGAATGATAGGTGACCTACCCATGGAACTTGTCCTCCCCACAATCTTTGTCACCATAAGCTATTGGATGGGAGGCCTCAAGGCTTCACTAATCACCTTCATGTTAACCCTCTTAATCATCATCTTAAATGTACTTGTCTCTCAAGGAATAGGCCTAGCACTTGGAGCCATATTAATGGAAGTGAAGCAAGCCACAGCCTTAGCTTCAGTGACCATGCTGGTTTTTCTTCTGGCTGGTGGCTACTACATTCAAAAGATTCCATCTTTCATAGCTTGGCTAAAGTACATATCTTTCAGTCACTATTGCTATAAGCTTCTGGTTGGTGTGCAATATGAAGAAAATGAGGTTTATGAGTGTGGTTTAGGGTTGCATTGTAGGGTAATGGATTTTCCTTCTATAAAGTGTTTGGGAGATCTTGATCATTTGTGGGCTGATGTGGCTGCTTTGTGTGTCATGTTGATTGGATACAGAGTTGTGGCTTATTTGGCTTTGAGGATGAGGCTGTCTCACTGA 2025 0.4746 MPPEQETTTVQMMPSIPAVPNRPPPENGSVHADPGGSAAINDKPSSDNYGIPSTRSVLHHQSLRPVTLKFEDVSYSITFESKKNGGFFSSGNPKPTRKILNGVMGIVRPGELMAMLGPSGSGKTTLLTALAGRLAGKFTGNITYNGLPFSSSMKRKTGFVSQDDVLYPHLTVLETLVFTALLRLPKSITKEEKVEQAEIVITELGLTRCRNTAVGGGASLFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTAAQRIVAVLRGLARRGQTVLTTIHQPSSRLYRMFDKVIVLSDGCPIYAGQSGRVMEYLESIGYPPTVNFMNPADFLLDLANGIVDDVKLDDQTDMNGRLDHIEDQASIKQSLFLSYKKILYPALKQEVQLNNEGRDGSPRSSDKQWNTSWWAQFRVLLKRGLLERRHESYSGLKIFQVLSVSILSGLLWWHSDPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLERPLLIKERSSGMYHLSSYYIARMIGDLPMELVLPTIFVTISYWMGGLKASLITFMLTLLIIILNVLVSQGIGLALGAILMEVKQATALASVTMLVFLLAGGYYIQKIPSFIAWLKYISFSHYCYKLLVGVQYEENEVYECGLGLHCRVMDFPSIKCLGDLDHLWADVAALCVMLIGYRVVAYLALRMRLSH 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1013 674 MobiDBLite consensus disorder prediction 1 53 - -
Alju12g1013 674 Pfam ABC-2 type transporter 410 615 IPR013525 GO:0016020|GO:0140359
Alju12g1013 674 MobiDBLite consensus disorder prediction 1 15 - -
Alju12g1013 674 FunFam ABC transporter G family member 22 88 318 - -
Alju12g1013 674 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 55 665 - -
Alju12g1013 674 Pfam ABC-2 type transporter 281 344 IPR043926 GO:0140359
Alju12g1013 674 Pfam ABC transporter 102 252 IPR003439 GO:0005524
Alju12g1013 674 ProSitePatterns ABC transporters family signature. 224 238 IPR017871 GO:0005524|GO:0016887
Alju12g1013 674 Gene3D - 70 318 IPR027417 -
Alju12g1013 674 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 68 324 IPR003439 GO:0005524
Alju12g1013 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 316 IPR027417 -
Alju12g1013 674 SMART AAA_5 109 301 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1013 Alju-ChrAlju12 30352146 30356228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1013 94 300 Calmodulin-binding Proteins AT2G36910 31.163 1.75e-13 72.4