Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0992 ATGGCTGGAACATCGTGGTTGGTGGACAAGAGCAGAATAGCAACCAAAATAAAGAGTGCTTCTGGGGCATTTGATCCTGAGAAGGTTAAATGGAAAAGCAATCCTACCAGAGCTTGCCCAAATTGTCAGCACATTATCGATAACAGCGATGTAGCACAAGAGTGGCCTGGATTGCCAAAGGGTGTGAAATTTGATCCATCGGATCAAGATATAATATGCCACTTGCTTGCTAAAGTTGGTGTGGAAAATTCAAGACCTCATCCTTTCATTGATGAATTTATCACTACTCTTGAAGTGGATGATGGAATTTGTTATACTCATCCAAAACATTTGCCAGGTGTTAATCAAGATGGAAGCGCAACCCACTTCTTCCATAGAGCAATCAAGGCTTACAATACTGGCACTCGAAAGCGTAGGAAAATACATGGCCAGGATTTTGGTGATGTCCGCTGGCACAAGACTGGAAGAACTAAACCTGTCATGTTGGACCAGGTTCAGAAGGGCTGTAAAAAGATTATGGTTCTTTATATGACCATGGTTAGAGGAGGCAAAGCGGAGAAAACTAATTGGGTTATGCATCAATATCACCTAGGAACACAAGAGGATGAGAAGGAAGGAGAGTATGTTGTCTCCAAAGTTTTTTACCAGCAGCAGCAGGTTAAATCGGTGGATAAAGACGACCTGGATGTTCCTGCAAGAACCTTGGATGTTCCTGAACGTTCTGAAAACATTGAAGCAGCAACGGTGCCAGTTGATCCAGTCACCCCAAAATCAGTGACCCCTGATCCACCTTGTAACAAAAGATCATTTCCAAACATTGATGTGGGACTAGAATCTCATCTCATTCCTCAGGATCCTCCAATGGATTGTGTGGAAGATGCGTCTGAAGCAGGTTGTGAAGAACCAAAAACTGATGCACTCATGGAAGAAAATCAAAATAGAAATGAAGGAACAGAAGATAATGAAAACGACGATGCTATTGAAGAACCTAAATGGTGGGATAGTGAATCACAGCATCTTTTGAATTCACAGCAACTTGTTGAAGCATTGTCCTTGTGTGAGGACCTCCTTCACAGCCAATCTCCCAGTAGAGATGACAATAGTGAAGAACATAAGAACCGACCCGGTCTTTCTGTCTATGCTCAACTAGGACCGGAGCATCTGAAAAAGGATATTGAAGAATGCCAAAATCTTTCAAATATAGAACTTGATACACCTCCTGACTTTCGACTAAGCCAGCTGGAGTTTGGTTCACAAGATAGCTACATTTCCTGGGGTGGCAGCAAGGCAGAGAACTGA 1299 0.4273 MAGTSWLVDKSRIATKIKSASGAFDPEKVKWKSNPTRACPNCQHIIDNSDVAQEWPGLPKGVKFDPSDQDIICHLLAKVGVENSRPHPFIDEFITTLEVDDGICYTHPKHLPGVNQDGSATHFFHRAIKAYNTGTRKRRKIHGQDFGDVRWHKTGRTKPVMLDQVQKGCKKIMVLYMTMVRGGKAEKTNWVMHQYHLGTQEDEKEGEYVVSKVFYQQQQVKSVDKDDLDVPARTLDVPERSENIEAATVPVDPVTPKSVTPDPPCNKRSFPNIDVGLESHLIPQDPPMDCVEDASEAGCEEPKTDALMEENQNRNEGTEDNENDDAIEEPKWWDSESQHLLNSQQLVEALSLCEDLLHSQSPSRDDNSEEHKNRPGLSVYAQLGPEHLKKDIEECQNLSNIELDTPPDFRLSQLEFGSQDSYISWGGSKAEN 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0992 432 MobiDBLite consensus disorder prediction 279 324 - -
Alju12g0992 432 FunFam NAC domain-containing protein 8 67 220 - -
Alju12g0992 432 MobiDBLite consensus disorder prediction 359 373 - -
Alju12g0992 432 SUPERFAMILY NAC domain 43 216 IPR036093 GO:0003677|GO:0006355
Alju12g0992 432 MobiDBLite consensus disorder prediction 296 320 - -
Alju12g0992 432 MobiDBLite consensus disorder prediction 358 378 - -
Alju12g0992 432 Pfam No apical meristem (NAM) protein 59 197 IPR003441 GO:0003677|GO:0006355
Alju12g0992 432 ProSiteProfiles NAC domain profile. 58 216 IPR003441 GO:0003677|GO:0006355
Alju12g0992 432 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 4 396 IPR044799 GO:0003700
Alju12g0992 432 Gene3D NAC domain 67 221 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0992 Alju-ChrAlju12 29868726 29872600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0992 5 218 NAC Transcription Factor Family AT4G28500 51.818 2.41e-71 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju12g0992 NAM 3.3e-20 No_clan