Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0984 ATGACGTCGCCGGAGCAGAATTTGAAGGGCGGACAATCGGAGTGTTGTTCAGGGCAGACATCATGGGAATTAGAAGGACCTGTTCTGGAGGAGTTCATACCTATCAAGAACAAAAATATTTCCAAAGACGATGAGCAACACTCACACAAACCCAAGACTTTCAAACATCACAATAACAGCAACACTGATAAGAGGAAATTGGATTGGCTTAGATCCCTCCAACTCTGGAATAATAATCCACAATCCCCAGATAACGAGGATATTCTTGGTCGGAAAACGTCGGTTTTGGAAGTAATTAAGGGAGATGGAGGTGCTTTTCATCCATTTCACAGAGAAACAACAAGTGTTGGAAAGACTACTACTGCATCAACGGCCAATAAAGCATCCTCCTCCTCGGTGCCGCCGGCGCCGGCAACAGTCGCCGGAAGCAACAAGAAAGAAGGACATAATAATAATAAAAGGAAGCAACGACGATGCTGGTCTCAGGAGCTGCATAAGCGTTTCTTAAACGCCCTTCACCAACTCGGTGGAGCAGATTTTGCAACACCGAAGCAGATAAGGGAACTTATGAAGGTTGATGGCCTAACAAATGATGAAGTAAAGAGTCATTTACAGAAATTTCGATTGCACAGGAGGAGGCCAAGCCCATTGATACAGAACAATGGCGATTCGCAAATGGCTCCAATTGTATTGGTGGGGAACTTTATAGTGCAACGGCCGTCGCCGGAACATGCAGCGGCGGTGGATACTTCGAAGGCTTCGTCAGAGAAAGTGACGACGAGGATGCAGCTGCCTGGGATTTATGCGCCGGTGGCGTCACATGCAACTGCGGTGGCACGGGCGGCGGTTCCAATGAAGGGTCAGAAGAGGCAATTGGATTTGGAGAATTGTTGTTGGGGACGTTCAAATTCAGAGGACAGCGAAGTGGCGGATCATTCAAATTCACCAACTTCGTCTTCCTCCACACATATTTGA 975 0.4728 MTSPEQNLKGGQSECCSGQTSWELEGPVLEEFIPIKNKNISKDDEQHSHKPKTFKHHNNSNTDKRKLDWLRSLQLWNNNPQSPDNEDILGRKTSVLEVIKGDGGAFHPFHRETTSVGKTTTASTANKASSSSVPPAPATVAGSNKKEGHNNNKRKQRRCWSQELHKRFLNALHQLGGADFATPKQIRELMKVDGLTNDEVKSHLQKFRLHRRRPSPLIQNNGDSQMAPIVLVGNFIVQRPSPEHAAAVDTSKASSEKVTTRMQLPGIYAPVASHATAVARAAVPMKGQKRQLDLENCCWGRSNSEDSEVADHSNSPTSSSSTHI 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0984 324 MobiDBLite consensus disorder prediction 39 65 - -
Alju12g0984 324 FunFam Myb family transcription factor 154 212 - -
Alju12g0984 324 MobiDBLite consensus disorder prediction 1 20 - -
Alju12g0984 324 Pfam Myb-like DNA-binding domain 157 206 IPR001005 -
Alju12g0984 324 SUPERFAMILY Homeodomain-like 153 213 IPR009057 -
Alju12g0984 324 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 13 281 IPR044787 GO:0003700|GO:0006355
Alju12g0984 324 MobiDBLite consensus disorder prediction 113 138 - -
Alju12g0984 324 NCBIfam myb-like DNA-binding domain, SHAQKYF class 155 210 IPR006447 GO:0003677
Alju12g0984 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 152 212 IPR017930 -
Alju12g0984 324 Gene3D - 154 213 - -
Alju12g0984 324 MobiDBLite consensus disorder prediction 301 324 - -
Alju12g0984 324 MobiDBLite consensus disorder prediction 106 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0984 Alju-ChrAlju12 29717393 29719411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0984 13 272 G2-like Transcription Factor Family AT1G68670 39.286 4.77e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju12g0984 Myb_DNA-binding 6.4e-06 CL0123