Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0977 ATGCAAAGCTTCAAGACCTCTCAATCAACCCCTCAACAACTCTATTGCCACCCCTCCTTCTTTCTTCGGGGAGATGACGCCGGCAGAAATCCTACACGTTTCTCTGATCTTGGAGAGCTTCAACATTCTCTTTCTCCCTTTCAACATGACGATGCTGTTGATTTAAGCTCAAGCTCTATGTTTACTGTTAAGTCCAGCAATGTCGCTATTGTTCCTATTAACTTGCAGTACGGGACACTGAGCTCGAACCTTGGGTCTTCAGAAATTGCTTCAACAGGGGCTGGGTGCCTTGATACAGGGCAGCATCTCATGTATCAGAAGGGATTCACAGCTGCCGGGGCCGCCATGCCGGCGGTGAACGGACATATGGAGAATTGGGGTGATTCCGGCATGGTAGATAATAGCCAACACACCGATACTTCCACAGACATCGACCCCGATGATAAAAACCAATGTAATAATAGTGTTCAGCCTGGGAGAGCCCTGGTTGCTGATTCCATGGAACAACCTAAGGCCAAACCTGAGGATCCAAAGACTCTTCGTAGGCTCGCTCAGAATCGAGAGGCTGCAAAGAAGAGTCGGTTAAGGAAAAAGGCATATGTACAGCAATTGGAGAACAGTCGTGTGAGACTAGCACAACTAGAACAAGAGCTCCAACGCGGAATGCTTGTTGCAAGTGGATATCCTGGTGATCATAGTCATTCAATGGTCGGAAACGGTGCCTTGGCATTTGACATGGACTATGCGCGTTGGGTCGATGAGCATCAGCAGCTGATAAATGACCTAAGAACAGCTGTAAATTCTCACATGGGAGATAATGAGCTGCATATTATTGTCGAGGGTGTTATGGCGCATTACGATGAATTATTTAGGTTAAAAAGCATAGGAGCAAAGGCTGATGTATTTCACATGCTCTATGGTACATGGAAGACTCCTGCAGAAAGATGTTTTATGTGGTTAGGTGGGTTTAGATCATCTGAACTTCTCAAGATACTGGTGAACCAGCTTGAGCCATTAACAGAGCAGCAAATGGTGGGCTTGCATAATTTGCAGCGGTCTTCGTCGCAGGCCGAGGATGCTTTAACACAAGGCATGGACGCATTGCATCAATCTCTTTCAGAGATACTTTCCTCAGCCTCCCTCGGACCCGCCGGCTCTGGAAATGTTGCTGAATACATGGGTCAAATGGCACTTGCTATGAGCAAACTTGCCACATTGGAGAGTTTCCTATATCAGGCTGATCTCTTGAGGCAACAAACGCTGCAACAACTGCAGAAAATCTTGACCACGCGACAAATAGCACGTGCATTCCTCGTGATAAATGACTACATTTCACGACTACGAGCGCTTAGTTCGTTATGGTTAGCTCGCCCTAGAGAGTAG 1383 0.4693 MQSFKTSQSTPQQLYCHPSFFLRGDDAGRNPTRFSDLGELQHSLSPFQHDDAVDLSSSSMFTVKSSNVAIVPINLQYGTLSSNLGSSEIASTGAGCLDTGQHLMYQKGFTAAGAAMPAVNGHMENWGDSGMVDNSQHTDTSTDIDPDDKNQCNNSVQPGRALVADSMEQPKAKPEDPKTLRRLAQNREAAKKSRLRKKAYVQQLENSRVRLAQLEQELQRGMLVASGYPGDHSHSMVGNGALAFDMDYARWVDEHQQLINDLRTAVNSHMGDNELHIIVEGVMAHYDELFRLKSIGAKADVFHMLYGTWKTPAERCFMWLGGFRSSELLKILVNQLEPLTEQQMVGLHNLQRSSSQAEDALTQGMDALHQSLSEILSSASLGPAGSGNVAEYMGQMALAMSKLATLESFLYQADLLRQQTLQQLQKILTTRQIARAFLVINDYISRLRALSSLWLARPRE 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0977 460 SMART brlzneu 174 225 IPR004827 GO:0003700|GO:0006355
Alju12g0977 460 Pfam Seed dormancy control 259 333 IPR025422 GO:0006351|GO:0043565
Alju12g0977 460 Pfam bZIP transcription factor 178 214 IPR004827 GO:0003700|GO:0006355
Alju12g0977 460 SUPERFAMILY Leucine zipper domain 179 220 IPR046347 GO:0003700|GO:0006355
Alju12g0977 460 PANTHER TRANSCRIPTION FACTOR TGA9 123 460 - -
Alju12g0977 460 Gene3D - 178 222 - -
Alju12g0977 460 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 176 220 IPR004827 GO:0003700|GO:0006355
Alju12g0977 460 ProSiteProfiles DOG1 domain profile. 241 457 IPR025422 GO:0006351|GO:0043565
Alju12g0977 460 MobiDBLite consensus disorder prediction 125 156 - -
Alju12g0977 460 Coils Coil 197 217 - -
Alju12g0977 460 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 181 196 IPR004827 GO:0003700|GO:0006355
Alju12g0977 460 FunFam BZIP family transcription factor 177 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0977 Alju-ChrAlju12 29549699 29552857 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0977 3 460 bZIP Transcription Factor Family AT1G68640 58.774 8.77e-166 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju12g0977 DOG1 8.7e-30 No_clan