Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0958 ATGAAAAATCTCACAAAACCTGGGAACCATATAAATTTCCTTAAAATGGCAAAGAAAAAGCCTCATGTAAACGAGCCCGTTATGTCCAGAAACCTGCGGATTATTTATAATGATCCTGAAGCCACAGATTCATCTTCAAGCGAAGACGAAGAAGATGGGTGTGAAAGCAGAAAGGTGAAGAGGACAAAACGAGTCGTTCGAGAGCTCACTCTACCGCCCAAACCTCCATCTCGTCTTCCTGAGAAGCCGGAGCCAGTTGAAACTGAAAGCTTTAATTGCCACTTTAATGGCAAATCAGTTAAAGTATGTGAACCATGTAAACCTAAACGACCGAGAAGACGTTCCTCTTCGCAGTACAGAGGCGTTCGACTCAGAAACTCTGGGAAATGGGCGGCGGAGATTCGCCATCCGATTAAAGGTCGTAAATGGTTGGGTACTTTTGATACTCCAGAGGAGGCATCTCGAGTTTATGAAGCCAAAAGAAGAGAGTTTGAAGCCATGGATTCTTTTACTGTTTCTCCATATTCATCAGACTCAGGCAGTGTTATTTCTCAGACATCACCACCCTCTGTTCTTGAAGTCTATACATCAGTTAAGAATCGTCGTATTTCAAGTAAAGGAGTCAATAATTTTGATTCTGCTCTTGCAGCTCTGCAAATGCCTGATTCGGTTTCGAATTCTTCAGAGGATTACAGGAATTCATGGGATGAAGACAATGATTTAGAATCTGGATTTGAAGCTCAACAAATCCCTGATTTGAGTTTGCAGAGAAATGACACTGACCTGGTGTCAATCAAAGAAGAAGCGAAGGATTTGGCGTCTGAGCTTAAAGCAAGTATGGAAATACCCGATTTGAGTATTATTTCAGAAGTGCCGATTCCAGAATGTTCAGTGCCTCACATGTTTGATCTGGATTGTTTAACGGTGGATGATTTGAATCAGTGTTTTGACGATGACGATGATCTTTCTGGGTTGCTGGGTGGTGGAATTTATGGGTTTAATGATGATGATGATGGGCCTTGTGAGCTTCCTGATTTTGATTTTACAGATTTTGGTGCAGATGACGAGTTTGCAGGTTGGATTGAGGAACCCCTCAATATACCTTGTGCATGA 1113 0.4205 MKNLTKPGNHINFLKMAKKKPHVNEPVMSRNLRIIYNDPEATDSSSSEDEEDGCESRKVKRTKRVVRELTLPPKPPSRLPEKPEPVETESFNCHFNGKSVKVCEPCKPKRPRRRSSSQYRGVRLRNSGKWAAEIRHPIKGRKWLGTFDTPEEASRVYEAKRREFEAMDSFTVSPYSSDSGSVISQTSPPSVLEVYTSVKNRRISSKGVNNFDSALAALQMPDSVSNSSEDYRNSWDEDNDLESGFEAQQIPDLSLQRNDTDLVSIKEEAKDLASELKASMEIPDLSIISEVPIPECSVPHMFDLDCLTVDDLNQCFDDDDDLSGLLGGGIYGFNDDDDGPCELPDFDFTDFGADDEFAGWIEEPLNIPCA 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0958 370 ProSiteProfiles AP2/ERF domain profile. 118 174 IPR001471 GO:0003700|GO:0006355
Alju12g0958 370 MobiDBLite consensus disorder prediction 36 86 - -
Alju12g0958 370 Gene3D AP2/ERF domain 117 171 IPR036955 GO:0003700|GO:0006355
Alju12g0958 370 PRINTS Ethylene responsive element binding protein signature 140 156 IPR001471 GO:0003700|GO:0006355
Alju12g0958 370 PRINTS Ethylene responsive element binding protein signature 119 130 IPR001471 GO:0003700|GO:0006355
Alju12g0958 370 SMART rav1_2 118 177 IPR001471 GO:0003700|GO:0006355
Alju12g0958 370 Pfam AP2 domain 118 166 IPR001471 GO:0003700|GO:0006355
Alju12g0958 370 SUPERFAMILY DNA-binding domain 117 164 IPR016177 GO:0003677
Alju12g0958 370 CDD AP2 117 159 IPR001471 GO:0003700|GO:0006355
Alju12g0958 370 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 29 184 - -
Alju12g0958 370 MobiDBLite consensus disorder prediction 51 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0958 Alju-ChrAlju12 29161793 29162905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0958 21 369 AP2-EREBP Transcription Factor Family AT1G68550 33.241 2.61e-30 116