Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0945 ATGGAGAATTCGCCGCCGAACGGAAAGTTTCCTTGGACTCGAAATTCCAGATTCTCGGCTAAGGAGGGAAGAAGTGGGTATGAACCATCAGATACAGAGACAGAGTGGCAAGAACTTCCCAGACATGAACGAGAAAGAAAGAATCTAACTTTAGGACATGAAGAAGCCAAAGTCCTCAACTTGAGGAATAAAATTCCCATGGAACTACACGGGAAGTATCCTTCTTCAAAGTTTGAACTAGAAATCTCATCTTCTACATCTTCAGTAGCAAGCGCAGCACGAAGGAGACCCCAAAGTAGATCGCCGTACCGGCCCTTCAGAGCCGCCGCCGACGGTGAGGCTCCATATCCGATAACTGGTTTGGATAATGTTCAGAGAAGTGTAAGCCCTGTGACAAAACCTGAATTTGCAAGAAGGCATACATCTCCATATCAACCTGAAAGAGAAAATCTGAATTGGAGAGCAGAGAAACCAAACCAGAGAAGAGCAATGACTGCTCCGAGGCAAAGGGGAGGAAGAGAAAGGGAACCATCATCCCATGGGACAAATCCTTCAATCGGAGAGATCAACGAGATGGTTGCTGAGGCGAAATTCACAAGAGATTCTATTAGTGATGAGCTCATAATAACAAGTACAGAGTCAAGTTTAGCAGGTGATATTTTCTTTTCTCGCGAATGTAATACCATGACAAAGCAAAAGACCTTGTTAACAAAACCTCCAAAACTTGAGGTTGAAACCCAATTCAATAGCTCAAGGCCTAATAAGGTCCTTCCCCAAAGAGGAACCCCTTTTCATCATCATCAACATCAAAACAGAGTAAATGGTAATGTCAATAATGTGAAAATACGAGGTACTTCATCATCTAGTACTATGACGTTGTCTCGATCGAGTAATGGTGGTAAGAGCAAGAAGAATAGTGGGAATTTAAGTGCTAGTGGTAGTGCGAAGGGTGATGTGAGTTGGACAAGTGTGAGCGTTCAGAAATTCATGATGAACAGGAAAAAGAAGCAAGCAGAGACATGGTTTGCTTGCATGAGAAGAGTAGGCAGGTCATCGAATAAATCGCCGGAACATCGATCGGTTGTTGAGGCTTCTATCATTGACAAAGCTTTTGTGCTCCAAAGCCTCCCACAATTCTGGGCAGATAAGCATCAACCCACGTCATTAGATGCCTTCATTTGCCACCAACAAGAAGCTCAGCTTCTCAAGGAATTAGTGTCTCAAGATGTGTGTCCTCATATTTTGCTAAAAGGGCCAATTGGTTCAGGAAAAAGAGCACTAGCAATGGCTCTTCTGCAAGAAATATTCGGGGATGCAATGTCAAACCTATCTCATGATTTAAGAAATTTCTCCATCCAGGAAAGAAGGCCAATGAAGATCACTGTTCCAATAAGGTCCAGCTCTCATCACATGGAGCTCAATGTAAATTTGGAACCTAATGCTAAATATGCTTTAATGGGATTAGTTAAGGAAATAAGCACTGAAGCTGCGATTACCCCTGAAGTCAGTAATTTCAATTTCAAGTCAGATTATAAAGTATTAGTTCTTTACGAGGTTGACAAGGCAGCTAACAACATTCAACATATGATCAAATGGATTATAGATCGCTACTCTGATACATGCAAAGTCATAGTTTGTTGCGAAGATGATGTGGACATTCTTGAACCGGTGAAAAACCGGTTCAAAGTTATTAATATTGATGCTCCACCAACTCATGAAATTATGGATGTTCTTATTCAGATAGCAAAACAAGAAGAAATTGATCTGTCCATGAATTTTGCTGCGAAGATTGCAACAAAGTCAAAGCAGAATCTCAGGAATGCAATTATGGCTCTTGAAGCATGCAGAGCACACAACTATCCATTTTCAGAAGAACAACCAATTCCCCTTGGATGGGAGGAGATTATAATGGAAATTTCTGCAGAGATACTATCTGATCCTTCACATTCACGCTTATACTCAATCAGAGGGAAATTACAGAAGCTTCTGGTGGATTTTGTTCACCCCAAGCTGATTCTCCGGAAACTGGTGGAACAACTCCTAAAAGGAATTGAGAGCAACTTAAAAAGGGAGCTCTTCTACTGGCACGCTTATTATAACAAGAGACTCCCACCAGGAACTACAGCTTTACTAAAATTAGAAGAATTTGTCGCCAAGTTTATGAGCATATACAGAAAAAGCACTAGCGGGCGACAGTTTGTGTAG 2205 0.415 MENSPPNGKFPWTRNSRFSAKEGRSGYEPSDTETEWQELPRHERERKNLTLGHEEAKVLNLRNKIPMELHGKYPSSKFELEISSSTSSVASAARRRPQSRSPYRPFRAAADGEAPYPITGLDNVQRSVSPVTKPEFARRHTSPYQPERENLNWRAEKPNQRRAMTAPRQRGGREREPSSHGTNPSIGEINEMVAEAKFTRDSISDELIITSTESSLAGDIFFSRECNTMTKQKTLLTKPPKLEVETQFNSSRPNKVLPQRGTPFHHHQHQNRVNGNVNNVKIRGTSSSSTMTLSRSSNGGKSKKNSGNLSASGSAKGDVSWTSVSVQKFMMNRKKKQAETWFACMRRVGRSSNKSPEHRSVVEASIIDKAFVLQSLPQFWADKHQPTSLDAFICHQQEAQLLKELVSQDVCPHILLKGPIGSGKRALAMALLQEIFGDAMSNLSHDLRNFSIQERRPMKITVPIRSSSHHMELNVNLEPNAKYALMGLVKEISTEAAITPEVSNFNFKSDYKVLVLYEVDKAANNIQHMIKWIIDRYSDTCKVIVCCEDDVDILEPVKNRFKVINIDAPPTHEIMDVLIQIAKQEEIDLSMNFAAKIATKSKQNLRNAIMALEACRAHNYPFSEEQPIPLGWEEIIMEISAEILSDPSHSRLYSIRGKLQKLLVDFVHPKLILRKLVEQLLKGIESNLKRELFYWHAYYNKRLPPGTTALLKLEEFVAKFMSIYRKSTSGRQFV 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0945 734 SUPERFAMILY post-AAA+ oligomerization domain-like 630 724 IPR008921 GO:0003677|GO:0006260
Alju12g0945 734 Gene3D - 378 569 IPR027417 -
Alju12g0945 734 MobiDBLite consensus disorder prediction 1 20 - -
Alju12g0945 734 Gene3D - 631 724 - -
Alju12g0945 734 MobiDBLite consensus disorder prediction 87 186 - -
Alju12g0945 734 MobiDBLite consensus disorder prediction 140 177 - -
Alju12g0945 734 MobiDBLite consensus disorder prediction 246 317 - -
Alju12g0945 734 FunFam Replication factor C subunit 3 378 569 - -
Alju12g0945 734 FunFam replication factor C subunit 3 570 628 - -
Alju12g0945 734 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 617 IPR027417 -
Alju12g0945 734 Gene3D - 571 628 - -
Alju12g0945 734 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 376 713 - -
Alju12g0945 734 MobiDBLite consensus disorder prediction 24 40 - -
Alju12g0945 734 MobiDBLite consensus disorder prediction 268 317 - -
Alju12g0945 734 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0945 Alju-ChrAlju12 28946967 28952205 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0945 379 725 Core DNA Replication Machinery Family AT5G27740 40.688 2.32e-85 272