Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0941 ATGGATCAAGGGCTTAAGCTTCCACTGATTCAGTCATCAGAAAGCCTAGAGGAGAATTCTTCTTCTTCTTCTCTACATTCTGAAGATTTTCCAGAAATGAGACCAAAGAAAGCAGTTGGATTCAAAAGGAAGAGGATTGAAAAGAAACAGAAAGAAGTAATCCAAGTAAGGGCAAAAAGAGGTCAAGCTACTGATAGTCACAGTTTAGCAGAAAGGGTGAGAAGAGAGAGAATCAATGAGAAGCTGAGATGTTTGCAGGACCTGGTTCCAGGCTGCTACAAGGCAATGGGAATGGCAGTTATGTTAGATGTGATCATAAACTATGTTCTATCACTACAGCAACAGATTGAGTTTCTCTCCATGAAGCTCTCAGCAGCAAGCATGTACTTTGATTTCAACACCTACCAGTTAGATACCCTACAAGCCATGCAGGTACCTCTTTCACTGTCATCTCTGTTTTGTACTTGTTTGACACTTACTATACATAAACACATACATATAGGAGTTGTTCTTGACCAACTAATCAGCATTAGAAGTATTGACACAGATGGAATCCAAGGGATGGAAAGGATGGAAGGAGAAGGTTATGGAGGCTTTGCTTATTGGAATCCTACATGGCCACTTCAATAA 630 0.4032 MDQGLKLPLIQSSESLEENSSSSSLHSEDFPEMRPKKAVGFKRKRIEKKQKEVIQVRAKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKAMGMAVMLDVIINYVLSLQQQIEFLSMKLSAASMYFDFNTYQLDTLQAMQVPLSLSSLFCTCLTLTIHKHIHIGVVLDQLISIRSIDTDGIQGMERMEGEGYGGFAYWNPTWPLQ 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0941 209 Gene3D - 62 125 IPR036638 GO:0046983
Alju12g0941 209 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 62 112 IPR011598 GO:0046983
Alju12g0941 209 SMART finulus 68 118 IPR011598 GO:0046983
Alju12g0941 209 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 22 139 IPR024097 GO:0006355
Alju12g0941 209 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 60 131 IPR036638 GO:0046983
Alju12g0941 209 MobiDBLite consensus disorder prediction 1 28 - -
Alju12g0941 209 MobiDBLite consensus disorder prediction 1 35 - -
Alju12g0941 209 Pfam Helix-loop-helix DNA-binding domain 66 90 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0941 Alju-ChrAlju12 28842461 28843896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0941 48 144 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 74.227 2.29e-47 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju12g0941 HLH 5.5e-05 No_clan