Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0930 ATGGAGGATCCTATTGATCACTACCAAGCAAAAAGAACGAACCCCAATAATTCCACCGCGCGATTAAAGCTCTTCGGCTTCAATGTTCAAGAAGATATAGAAGATGAAGTAGTGCTTGAAGATGTATCAGATTCCACAGGCAAGCCTGGATCACCGGAGTCCGGCGGCGGCGGCGAAGGAGGAGTTGGTATTGGTGGTGGGGGTGGCGGTGGAGTTGGAGCGTTCCTTCCCTCCTCTGGTGACCGGAAATACGAGTGTCAGTATTGTTGCCGAGAGTTTGCGAATTCACAAGCGCTGGGTGGTCACCAGAACGCGCACAAGAAGGAGCGTCAACAACTAAAACGAGCGCAGTTGCAAGCCACGCGAAACGCCGCCGTTTCGTTCGTTCGGAACCCGATAATCTCCGCTTTTTCTCCACCGCCGCACCTCCTGGCTCCGAACGGTTCCGTTGTGGTACCGGCAGCTCCGGCGTCGTGGGTTTATATGCCACCACGTTCCGCGCCGTCTCCGTTCCACGTGTCGGTGTCGCACGGCTGTGTGTTCCCCTCATCGTCGCCGCCGCCGCCGAGTAACGCTGTGAATTATAGTGGTATTACAGGTGGTAGATCAGCGGGTGCAGGGATGGTTCTCTACGGTGGCGGTGCAGGGGATTCGTCATCCACATTGTCGTCCCTTGGGTCGCCACAAGCACTGTCTCGGGTCAACGGCCGGGTTGACGGGCCTTCCTTGAGCCGGTTCTCCAAGGTGGAAGCTGGGCCCAATTTCGATGATTCATTGGGCCTGGACTTGCATCTAAGCCTAGCACCGGCTGCGCCGTGA 819 0.5678 MEDPIDHYQAKRTNPNNSTARLKLFGFNVQEDIEDEVVLEDVSDSTGKPGSPESGGGGEGGVGIGGGGGGGVGAFLPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPIISAFSPPPHLLAPNGSVVVPAAPASWVYMPPRSAPSPFHVSVSHGCVFPSSSPPPPSNAVNYSGITGGRSAGAGMVLYGGGAGDSSSTLSSLGSPQALSRVNGRVDGPSLSRFSKVEAGPNFDDSLGLDLHLSLAPAAP 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0930 272 PANTHER ZINC FINGER PROTEIN 5 11 271 IPR044299 GO:0010090
Alju12g0930 272 MobiDBLite consensus disorder prediction 216 231 - -
Alju12g0930 272 SUPERFAMILY beta-beta-alpha zinc fingers 80 111 IPR036236 -
Alju12g0930 272 FunFam Zinc finger protein GIS3 72 134 - -
Alju12g0930 272 MobiDBLite consensus disorder prediction 36 64 - -
Alju12g0930 272 MobiDBLite consensus disorder prediction 215 241 - -
Alju12g0930 272 Gene3D Classic Zinc Finger 76 131 - -
Alju12g0930 272 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Alju12g0930 272 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 111 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0930 Alju-ChrAlju12 28573622 28574440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0930 16 270 C2H2 Transcription Factor Family AT1G68360 47.368 1.36e-55 177