Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju12g0929 | ATGGGTACAGGTTCCAAGATCGATGGACCTTCGACCCCATCAATTCGGCGAGACCCTTATGAGGTATTGTCCGTGCCAAGGGACGCAAATGACCAGGACATAAAAACGGCTTACAGAAAGCTCGCTCTCAAGTATCACCCTGACAAGAACGCTAACAATCCTGAAGCATCAGAATTATTTAAAGAGGTTGCATATTCTTACAACATCTTATCTGATCCAGAGAAGAGAAGGCAGTATGATAGTGCAGGATTTGAGGCACTGGATGCTGATAACTTGGACATGGAAATTGATTTGTCAAATCTTGGAACTGTTAACACAATGTTTGCAGCTTTATTCAGCAAGCTGGGTGTCCCTATCAAGACTACTATCTCAGCGAATGTTCTTGAAGAAGCCCTGAATGGCACAGTTACAGTCAGACCTCTTCCTATTGGGACGTCAGTTAGTGGCAAGGTAGAGAAGCAATCTGCTCATTTTTATGGTGTGACGATAAATGAGCAGCAAGCTGAGGCAGGGATTGTAGTAAGAGTTACTTCAACAGCACAAAGCAAATTCAAACTGCTCTACTTTGAACATGATGCAAATGGTGGGTATGGTTTGGCGTTACAGGAAGATAGCGAAAAGACTGGTAAAGTGACATCCACTGGCATGTATTTCTTACATTTTCAAGTATACAGAATGGATGCAACTGTGAATGCGTTAGCAATGGCAAAGGATCCTGAAGCTGCTTTCTTCAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCAGAATTAAAGCCTGACACTCATATATTTGCTGTTTATGGAGATAACTTCTTTAAGACTGCTAGCTATACTATTGAGGCTCTTTGTGCAAAATCTTATGAGGGTACCTCTGAGAAACTTAAGGACATTGAAGCTCAAATTCTTAAAAAAAGGAATGATTTGCGCCAATTTGAATCAGAATACAGAAAGGTATTGGCACGCTATCAAGAGGTAACTGAAAGATATACTCAAGAAAAACAAGCGGTTGATGAACTTCTGAAAGAGAGAGACACTATTCATAGTTCCTTCACCATTGCGAGGTCCATCTCTGTCAGCACGAACAGCAGTAATTTAAGTAACGGAAGTAGTAGCAAAATTGCCGGCGAGGATTCCAATTCCAAGGCAGAGAGCCCTGTGGAAGATGGAAGCTCAGATGGCAAGGACAAATCAGGCAAAAAGAAATGGTTCAACCTCAATCTTAAGGGGTCTGATAAGAGAAATTGA | 1248 | 0.4167 | MGTGSKIDGPSTPSIRRDPYEVLSVPRDANDQDIKTAYRKLALKYHPDKNANNPEASELFKEVAYSYNILSDPEKRRQYDSAGFEALDADNLDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVEKQSAHFYGVTINEQQAEAGIVVRVTSTAQSKFKLLYFEHDANGGYGLALQEDSEKTGKVTSTGMYFLHFQVYRMDATVNALAMAKDPEAAFFKRLEGLQPCEVSELKPDTHIFAVYGDNFFKTASYTIEALCAKSYEGTSEKLKDIEAQILKKRNDLRQFESEYRKVLARYQEVTERYTQEKQAVDELLKERDTIHSSFTIARSISVSTNSSNLSNGSSSKIAGEDSNSKAESPVEDGSSDGKDKSGKKKWFNLNLKGSDKRN | 415 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju12g0929 | 415 | FunFam | Chaperone protein dnaJ 16 | 3 | 100 | - | - | |
| Alju12g0929 | 415 | MobiDBLite | consensus disorder prediction | 382 | 415 | - | - | |
| Alju12g0929 | 415 | CDD | DnaJ | 18 | 72 | IPR001623 | - | |
| Alju12g0929 | 415 | SUPERFAMILY | Chaperone J-domain | 17 | 87 | IPR036869 | - | |
| Alju12g0929 | 415 | Coils | Coil | 288 | 343 | - | - | |
| Alju12g0929 | 415 | PRINTS | DnaJ domain signature | 20 | 38 | IPR001623 | - | |
| Alju12g0929 | 415 | PRINTS | DnaJ domain signature | 38 | 53 | IPR001623 | - | |
| Alju12g0929 | 415 | PRINTS | DnaJ domain signature | 75 | 94 | IPR001623 | - | |
| Alju12g0929 | 415 | PRINTS | DnaJ domain signature | 55 | 75 | IPR001623 | - | |
| Alju12g0929 | 415 | MobiDBLite | consensus disorder prediction | 361 | 415 | - | - | |
| Alju12g0929 | 415 | PANTHER | DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) | 14 | 414 | - | - | |
| Alju12g0929 | 415 | Pfam | DnaJ domain | 18 | 80 | IPR001623 | - | |
| Alju12g0929 | 415 | ProSiteProfiles | dnaJ domain profile. | 18 | 83 | IPR001623 | - | |
| Alju12g0929 | 415 | SMART | dnaj_3 | 17 | 75 | IPR001623 | - | |
| Alju12g0929 | 415 | Gene3D | DnaJ domain | 8 | 99 | IPR036869 | - | |
| Alju12g0929 | 415 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
| Alju12g0929 | 415 | ProSitePatterns | Nt-dnaJ domain signature. | 60 | 79 | IPR018253 | - | |
| Alju12g0929 | 415 | MobiDBLite | consensus disorder prediction | 361 | 379 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju12g0929 | Alju-ChrAlju12 | 28548067 | 28554078 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju12g0929 | 11 | 91 | C2H2 Transcription Factor Family | AT1G74250 | 38.372 | 1.89e-11 | 63.9 |