Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0926 ATGGCGACACCCTCTCGCCTCTCTCTACTGGTTTTCTTCTTCTTCTTCTACTTAGTTTCTCATTTGCTTCTTCCCACTGAAGCGTCCATAAACCAAGATTTAGAAGCTTTAATGGCGTTCAAAGCCGCTTCTGATACTCACAACAAGCTCGCATCTTGGAACTCCAGCACCCACCCCTGTAACTGGGTTTTTGTCTCATGCCTCAAGAATCGAGTTTCGCGACTTGTTCTTGAGAACCTCGATCTCCATGGCTCTATCGAGCCGTTAACTTCTCTGTCTCAGCTTCGAGTTCTGAGCCTGAAACGAAACCGTTTTTCCGGTCCCATTCCAAGTCTGTCTAATTTTACAGCTCTGAAGCTCCTGTTTCTTTCTCACAATGAGTTCTCCGGTGAGTTTCCGGTGACGGTTACGTCGCTTCTCCGTTTGTACCGCCTTGATCTGTCTCACAACAATTTCTCCGGCAGCATTCCAACTACGGTCAACAATCTGACTCACCTTCTCTCCCTCCGTCTTAATGACAACCAGTTCTCCGGTCACATTCCCAGTCTAAACCTCTCCAAGCTACAAGACTTCAATGTCTCCGGCAACCACCTCTCCGGCGAAATACCCAAATCAGTCTCGGGTTTCCCCGAATCGTCATTCGCCCAAAACCCATCTCTATGCGGAACTCCATTTGTGAAATGTAAGGACCCTCATGCCGTACCGTTTAAACCGGACGGATCTGTGGGACCCAATATTGCATCGCCATTGACGCCGAGAAGCAATCCTTCAACACCTTCGAACAACAAAGCAACCCCCAAAACACCATCTAACACCACCCACCACCATCATAACGGAGCTTCAAAGATGAGCCCAGTGATTCTAATCGCCATTATAGTGGGCGACGTTTTGATTCTTGCCATAGTGTCCCTTCTTTTGTACTGCTGCTTCTGGCAAAATTACTCAGCAAAATTGAAACAAGGAAACAAAAGGTCGAAGCTTCTAGAAGGCGAGAAGATCTTGTATTCATCAAGCCCATACCCACAATCATCAACCCAAATCGAATTAGAGAGGGGTCAAATGGTGTTCTTCGAAGGGATGAAGAAGTATGAGCTAGAGGATTTGCTGCGAGCTTCTGCAGAAATGTTAGGGAAAGGTGGATTTGGGACGGCGTATAAAGCTGTTCTTGATGACGGCAATGTCGTCGCCGTGAAGAGGCTTAAGGATGCTCAGATTAATGGGAAGAAAGAGTTCGAGCAACACATGGAAGTTCTTGGAAGATTGAGGCATCCTAATATTGTGAGCTTGAGAGCTTACTATTATGCTCGAGATGAGAGATTGCTGGTTTATGATTACATGACGAATGGAAACTTGTTTTGGCTCCTTCATGGGAACCGAGGACCCGGAAGAAGCCCACTGGATTGGACCACTCGGCTCAAGATAGCCGCTGGAGTGGGGCGAGGGTTAGCCTTTATTCACGGCTCATGCAAGGCCCTTAAGCTCACCCACGGTAACATCAAATCCACCAACATCCTTATCGACCAGGACGGGGAGCCACACGTGGCAGACTTTGGTCTCTCCGTTTTTGCAGTACCAGCCACCAGATCGAACGGCTATCGTGCCCCAGAAGCAATGGACGGTCAGAAGAATACGCAGAAATCTGACGTGTACTCATTCGGTGTTCTTCTGCTGGAGCTTCTCACGGGGAAGTGCCCTTCTGTGGGGGAGTCGGGTGGGCCCGGGGGAGGTGGGGCCGTGGACCTACCCAGGTGGGTCCAGTCAGTGGTGAGAGAGGAATGGACGGCTGAGGTGTTCGACATCGAGCTGATGAGGTACAAGGACATTGAAGAGGAAATGGTTGGGCTGCTTCAGATCGCGATGACTTGTTGCGCTGCTGTACCAGATCAACGGCCCAGGGTGAGCCACGTGGTGAAAATGATCGAAGATATACGTGGGGTGGAGATTTCGCCGAGTCATGACACGTCGGACTCGGTGTCTGAGTCGCCATCGTTTTCGGGTTAG 2001 0.4968 MATPSRLSLLVFFFFFYLVSHLLLPTEASINQDLEALMAFKAASDTHNKLASWNSSTHPCNWVFVSCLKNRVSRLVLENLDLHGSIEPLTSLSQLRVLSLKRNRFSGPIPSLSNFTALKLLFLSHNEFSGEFPVTVTSLLRLYRLDLSHNNFSGSIPTTVNNLTHLLSLRLNDNQFSGHIPSLNLSKLQDFNVSGNHLSGEIPKSVSGFPESSFAQNPSLCGTPFVKCKDPHAVPFKPDGSVGPNIASPLTPRSNPSTPSNNKATPKTPSNTTHHHHNGASKMSPVILIAIIVGDVLILAIVSLLLYCCFWQNYSAKLKQGNKRSKLLEGEKILYSSSPYPQSSTQIELERGQMVFFEGMKKYELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQINGKKEFEQHMEVLGRLRHPNIVSLRAYYYARDERLLVYDYMTNGNLFWLLHGNRGPGRSPLDWTTRLKIAAGVGRGLAFIHGSCKALKLTHGNIKSTNILIDQDGEPHVADFGLSVFAVPATRSNGYRAPEAMDGQKNTQKSDVYSFGVLLLELLTGKCPSVGESGGPGGGGAVDLPRWVQSVVREEWTAEVFDIELMRYKDIEEEMVGLLQIAMTCCAAVPDQRPRVSHVVKMIEDIRGVEISPSHDTSDSVSESPSFSG 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0926 666 ProSitePatterns Protein kinases ATP-binding region signature. 376 398 IPR017441 GO:0005524
Alju12g0926 666 Gene3D Ribonuclease Inhibitor 90 234 IPR032675 -
Alju12g0926 666 MobiDBLite consensus disorder prediction 247 279 - -
Alju12g0926 666 Gene3D Ribonuclease Inhibitor 24 89 IPR032675 -
Alju12g0926 666 ProSiteProfiles Protein kinase domain profile. 370 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0926 666 SUPERFAMILY Protein kinase-like (PK-like) 374 640 IPR011009 -
Alju12g0926 666 Gene3D Transferase(Phosphotransferase) domain 1 446 659 - -
Alju12g0926 666 Pfam Protein kinase domain 373 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0926 666 FunFam pollen receptor-like kinase 1 341 445 - -
Alju12g0926 666 Gene3D Phosphorylase Kinase; domain 1 341 445 - -
Alju12g0926 666 SUPERFAMILY L domain-like 41 220 - -
Alju12g0926 666 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 446 653 - -
Alju12g0926 666 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 644 IPR046959 -
Alju12g0926 666 MobiDBLite consensus disorder prediction 237 279 - -
Alju12g0926 666 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Alju12g0926 666 FunFam Leucine-rich repeat receptor-like protein kinase 30 182 - -
Alju12g0926 666 CDD STKc_IRAK 376 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0926 Alju-ChrAlju12 28508829 28512283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0926 33 665 Receptor kinase-like Gene Family AT1G68400 65.426 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju12g0926 Pkinase 1.2e-38 CL0016