Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0921 ATGAGTAGCAATGGCCAATCTTCCTTTAACAGTCATTATATCAGAGACTTAATCTGCAACGCCGGTGCTGGTGCCTCGGCTGGGGCAATAGCAGCCACATTTGTGTGCCCATTGGATGTCATCAAGACTAGACTACAAGTTCATGGTCTTCCCCCTGGTCAGAAGGGTAGTGTTATCATCACAAGTTTGCAGAATATAGCAAGGACTGAAGGTTTCAGGGGACTGTACCGTGGACTTTCACCGACAATACTAGCATTACTGCCAAACTGGGCGGTTTACTTCACAGTTTATGAGCAACTAAAAGGCCTGCTTCGTACACATGATGGCTGGCACCAACTCACAACTGGTGAAAATATGATAGCTGCTGCTGGTGCTGGAGCAGCCACATCAATTTCAACAAATCCATTGTGGGTTGTTAAGACCAGACTCCAAACTCAGGGAATGAGGCCAGATGTCGTTCCTTACAAAAGTGTTGTTTCTGCTCTGACAAGGATTACCCGTGAGGAGGGCATACGAGGACTGTACAGTGGCATCTTGCCTTCATTGGCCGGCATAAGTCATGTTGCAATACAATTCCCATCTTATGAAAAGATTAAGTCATACATGGCAAAAAAGGAAAACACTACAGTTGACAAGCTAAGTCCGGGAAATGTTGCCATTGCATCTTCAATTTCCAAAGTAATAGCCTCTGTAATGACTTATCCTCATGAGGTGATACGATCCAGGCTACAGGCGCAAGGACAGGCCAAAAATACAAAGGTCCGGTATGCAGGGGTTGTTGATTGTACTAAGAAGGTCTTCCTGAAGGATGGCTTTCCAGGCTTTTATCGCGGTTGTGCTACCAATCTATTAAGAACAACTCCATCAGCAGTCATCACATTCACTAGTTACGAGATGATATACAGGTTCTTCCATCGTTTCATACCTCAGGACAATGTATATCCGCAAGGCTATCCTAAAACTAATGATCTTAACAAGCCCAAGCCAGAAGACAGTGATGATATTAAGTTTGAAAAAGGCCCTATGGAGAATCATTGTTCAAAAGCCACGTCAAAGTCTTCTACCTTCAATGGGAGACTCAAGTTTCATAGCTACAATTGGACCCAGAGTGGCTGCAGTCACCATCTCAATCTGATGGATAGAAAAGCTTCATCAGTTCTTCTGGGAAATAAAGAGCGGCTAACTTTTGATACTTGA 1197 0.4403 MSSNGQSSFNSHYIRDLICNAGAGASAGAIAATFVCPLDVIKTRLQVHGLPPGQKGSVIITSLQNIARTEGFRGLYRGLSPTILALLPNWAVYFTVYEQLKGLLRTHDGWHQLTTGENMIAAAGAGAATSISTNPLWVVKTRLQTQGMRPDVVPYKSVVSALTRITREEGIRGLYSGILPSLAGISHVAIQFPSYEKIKSYMAKKENTTVDKLSPGNVAIASSISKVIASVMTYPHEVIRSRLQAQGQAKNTKVRYAGVVDCTKKVFLKDGFPGFYRGCATNLLRTTPSAVITFTSYEMIYRFFHRFIPQDNVYPQGYPKTNDLNKPKPEDSDDIKFEKGPMENHCSKATSKSSTFNGRLKFHSYNWTQSGCSHHLNLMDRKASSVLLGNKERLTFDT 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0921 398 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Alju12g0921 398 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Alju12g0921 398 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Alju12g0921 398 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Alju12g0921 398 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Alju12g0921 398 Gene3D Mitochondrial carrier domain 111 307 IPR023395 -
Alju12g0921 398 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Alju12g0921 398 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 16 309 IPR044712 GO:0006862|GO:0055085
Alju12g0921 398 Pfam Mitochondrial carrier protein 20 106 IPR018108 -
Alju12g0921 398 Pfam Mitochondrial carrier protein 213 305 IPR018108 -
Alju12g0921 398 Pfam Mitochondrial carrier protein 113 205 IPR018108 -
Alju12g0921 398 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 16 304 - -
Alju12g0921 398 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 303 IPR018108 -
Alju12g0921 398 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Alju12g0921 398 SUPERFAMILY Mitochondrial carrier 17 299 IPR023395 -
Alju12g0921 398 Gene3D Mitochondrial carrier domain 3 110 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0921 Alju-ChrAlju12 28412501 28418433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0921 1 344 Chloroplast and Mitochondria Gene Families AT1G25380 65.903 2.54e-150 428