Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0906 ATGCTTCCTTTGGTCTTCTTGTTTCTTCTCCTTCTCTGTAATAATCTTTCAACTGTGATTTCTCTAAATGCTGAAGGCTATGTCCTTTTGGCTCTGAAGCAGTCCATTACAGACCCAGGAGGGTCTATGAGTAACTGGAATTCTTCTGATGAAAACCCCTGTTCGTGGAATGGTGTTACATGCAAGGAACAAACTGTTATTTCTCTCAGTATCCCAAAGAGGAAGCTTTACGGCTCGCTTCCTTCTTCTTTTGGATCTCTTTCTCAGCTTCGCCATGTGAATTTCAGGAACAATAAGCTCTTTGGGAAGTTGCCTCCTGAGCTATTCCTAGCACAGGGGCTTCAAAGTTTAGTCCTTTATGGCAATTCCTTTTCTGGGCCTGTTCCACAAGAGATTGGGGAGCTCAGGTACCTTCAAACCTTAGATTTATCTCAAAATTTCTTCAATGGGTCTTTACCTGCTTCAATTGTCCAATGCAAGAGACTCAGAACCCTTGTTCTGGATCACAACAATTTCTCTGGTCCTCTTCCGGATCGATTTGGTACTGATTTGCTCTCTCTGGAAAAACTTGACCTTGCTTTCAATCACTTCAATGGCTCAATTCCTAGTGATATGGGGAATCTATCTAGCCTACAAGGAACTGCAGATTTATCTCATAATAGTTTTTCTGGCTCAATCCCACCCAGCCTTGGTAATTTACCTGAGAAGGTTTATATTGATCTTACTTTCAACAATTTGAGTGGTCCTATACCACAAAATGGTGCTTTGATGAACAGAGGACCAACAGCTTTTATAGGCAACTCTGGTCTCTGTGGACCTCCTTTGAAAAACCCTTGTTCTTCAGAAACTCCTGGTGCTAGTTCGCCTTCCTCATTTCCATTTCTGCCAGATAACTACCCACCTGGGGATTCTAATAATCCTTATGGGAGAAATGAGAAAACCAAGGGGTTAAGTAAGGGTGCTATTGTAGGCATTGTTGTGGGTGATATAGTTGGAATTTGTCTCTTGGGTTTGTTGTTCTCTTACTGCTACTCAAGGGTTTGTGGGTTTAATCTGGATAATGAGGATGAAGCTGGTTTTGATAAGGGAGAGAAAGGAAGGAGGAAAGAGTGTTTTTGCTTTAGAAAGGATGAATCTGAGACCTTATCAGATAATGTTGAGCAATATGATCTTGTCCCTTTGGATTCTCAAGTGGCATTTGATTTGGATGAGCTTCTCAAGGCTTCAGCTTTTGTTTTGGGTAAGAGTGGAATAGGCATTGTCTACAAGGTGGTGCTTGAAGATGGGCTTACTTTAGCCGTTAGAAGATTAGGCGAAGGGGGTTCTCAAAGGTTTAAAGAATTCCAAACAGAAGTGGAAGCAATAGGAAGATTAAGGTATCCTAACATTGTTACCCTTAGAGCTTATTACTGGTCTGTTGATGAGAAACTTCTCATCTATGATTATATACCCAATGGAAATCTTGCTACAGCAATTCATGGGAAGGCTGGAATAGTTGCATTCACGCCAATTTCTTGGTCGGTTAGGCTGAAAATCATGAAAGGAATCGCGAAAGGATTGGTCTACTTGCATGAGTTTAGCCCCAAAAAGTATGTTCATGGAGACCTCAAACCAAGTAACATACTGCTTGGGAATGACATGGAACCCCACATTTCTGATTTTGGACTTGGAAGACTTGCGAATATTGCTGGAGGGTCTCCAACCTTGCAATCCAACCGAGTCGCCGCTGAGAAACCCCATGAGAGGCAAAAGAGCTTTTCTGCATCAGAAGTCTCAGCTAATGTTTTGGGAACTGGCTATCAGGCTCCGGAAGCATTGAAAGTGGTGAAGCCATCACAGAAATGGGACGTATATTCATATGGTGTGATTTTGATAGAGATGATCACAGGAAGGTTACCCATTGTCCATGTGGGAAACTCGGAAATGGACCTTGTCCAATGGATTCAGTTCTGCATTGAGGATAAGAAGCCACTGTCAGATGTAATAGACCCGTATCTCCCGGAAGAGGACGCGGATAAGGAAGAGGAGATCATCGCGGTTTTGAAGATCGCAATGGCTTGTGTCCATGGCAGCCCCGAGAAGAGACCGACAATGAGGCATGTTCTTGATGCTTTGGATAGGTTGTCTGCTTCTTCTGATTGA 2142 0.4281 MLPLVFLFLLLLCNNLSTVISLNAEGYVLLALKQSITDPGGSMSNWNSSDENPCSWNGVTCKEQTVISLSIPKRKLYGSLPSSFGSLSQLRHVNFRNNKLFGKLPPELFLAQGLQSLVLYGNSFSGPVPQEIGELRYLQTLDLSQNFFNGSLPASIVQCKRLRTLVLDHNNFSGPLPDRFGTDLLSLEKLDLAFNHFNGSIPSDMGNLSSLQGTADLSHNSFSGSIPPSLGNLPEKVYIDLTFNNLSGPIPQNGALMNRGPTAFIGNSGLCGPPLKNPCSSETPGASSPSSFPFLPDNYPPGDSNNPYGRNEKTKGLSKGAIVGIVVGDIVGICLLGLLFSYCYSRVCGFNLDNEDEAGFDKGEKGRRKECFCFRKDESETLSDNVEQYDLVPLDSQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRFKEFQTEVEAIGRLRYPNIVTLRAYYWSVDEKLLIYDYIPNGNLATAIHGKAGIVAFTPISWSVRLKIMKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGNDMEPHISDFGLGRLANIAGGSPTLQSNRVAAEKPHERQKSFSASEVSANVLGTGYQAPEALKVVKPSQKWDVYSYGVILIEMITGRLPIVHVGNSEMDLVQWIQFCIEDKKPLSDVIDPYLPEEDADKEEEIIAVLKIAMACVHGSPEKRPTMRHVLDALDRLSASSD 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0906 713 SUPERFAMILY L domain-like 24 276 - -
Alju12g0906 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Alju12g0906 713 FunFam Leucine-rich repeat protein kinase family protein 483 711 - -
Alju12g0906 713 CDD STKc_IRAK 413 708 - -
Alju12g0906 713 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 159 710 IPR046959 -
Alju12g0906 713 FunFam Leucine-rich repeat receptor-like protein kinase 390 482 - -
Alju12g0906 713 Gene3D Ribonuclease Inhibitor 22 181 IPR032675 -
Alju12g0906 713 Gene3D Ribonuclease Inhibitor 182 280 IPR032675 -
Alju12g0906 713 SUPERFAMILY Protein kinase-like (PK-like) 412 705 IPR011009 -
Alju12g0906 713 Gene3D Transferase(Phosphotransferase) domain 1 483 713 - -
Alju12g0906 713 FunFam Leucine-rich repeat receptor-like protein kinase 186 281 - -
Alju12g0906 713 MobiDBLite consensus disorder prediction 276 312 - -
Alju12g0906 713 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 22 182 - -
Alju12g0906 713 SMART serkin_6 412 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0906 713 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Alju12g0906 713 Gene3D Phosphorylase Kinase; domain 1 376 482 - -
Alju12g0906 713 ProSiteProfiles Protein kinase domain profile. 407 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0906 713 Pfam Leucine Rich Repeat 138 157 IPR001611 GO:0005515
Alju12g0906 713 Pfam Protein kinase domain 413 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0906 Alju-ChrAlju12 27870201 27872508 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0906 1 713 Receptor kinase-like Gene Family AT2G01210 69.018 0.0 1005
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju12g0906 Pkinase 2.8e-33 CL0016