Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0905 ATGGATTCAAACACTTCAAGCTTTCTTCTGAACTCTTCAACTACTTTTCACTCTGATTTCTACCAAAGCAAAGAGGATGAAGATGATGATCATGGCATGATTGATCTGGGACTTAGCCTCAGAACTGTCCAACCTGAAGCTTATCATGCTTCTAGCAACTTTTTGAGTTTGTGGAGATATGACGATGACCTTATGGATTGGCCGGCACAGTCTAATAATCTGAACAACCTCAAGAGCTCAAGCACAACAATGCATTCTAAATCTGTTGCAGAAAACTTTGATGAAGAAATAGAAGGAGTTCAAAGCAATGATAGGTGGGCTTATGTGAAGGTCAATATGGATGGTGTTACAGTAGGCAGAAAAATCTGTGTCCTTGATCATGAAGGCTACCCAAGTCTTTCAAACCAGTTAGAGAACATGTTTGGAAGCAAATCTGTTTCTGGTTTGAAACTGTTTCAATCTGAGTCAGAGTATGTACTGTTCTACAAAGACAGAGAAGATCATTGGAGGACAGTGGGTGATGTCCCATGGAAAGAATTTGTAGAAAGTGTGAAGAGGCTGAGGATTGCAAGAAAGAATAAAGCAGCCTAA 591 0.3993 MDSNTSSFLLNSSTTFHSDFYQSKEDEDDDHGMIDLGLSLRTVQPEAYHASSNFLSLWRYDDDLMDWPAQSNNLNNLKSSSTTMHSKSVAENFDEEIEGVQSNDRWAYVKVNMDGVTVGRKICVLDHEGYPSLSNQLENMFGSKSVSGLKLFQSESEYVLFYKDREDHWRTVGDVPWKEFVESVKRLRIARKNKAA 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0905 196 Gene3D - 100 196 - -
Alju12g0905 196 Pfam AUX/IAA family 69 195 IPR033389 -
Alju12g0905 196 SUPERFAMILY CAD & PB1 domains 105 189 - -
Alju12g0905 196 ProSiteProfiles PB1 domain profile. 106 194 IPR000270 GO:0005515
Alju12g0905 196 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 53 195 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0905 Alju-ChrAlju12 27864581 27865874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0905 90 189 B3 DNA Binding Superfamily AT4G23980 33.000 2.94e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Alju12g0905 AUX_IAA 5.5e-25 CL0072