Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0894 ATGGAAGATAGAGCTTTCTTACCGATCAGTTCAGTTCCTAGTTTTGCTCAAGGCCTTAAGATTTTGCTGCTTCATAATAATACCTTGTCCCTCATGAACTTGTCATCCATGCTTGAGAAGTACTCATTCAGAGTTACTGTTACTGATGAAGTAAAAGCAGCTATGTCGATGATTTGTGATGCTGAAGAAGGCCAATTCAACCTGGTAATGGCTAAAGATAACATGCCTGACATGGATATTCTTTCATTTCTGCATTTCATGCTTGAAAAGTACATCCCTGTCATCTTCATGACTTCCGAAGAATATAGTGATGTAACATGGAAAGCATTGGCCAAAGGCTCATGTTTTTTCCTGGAAGAGCCAATCCTTTTAGAGGATCTCAAATATGTGTGGCAGCATGTTTATCACACAAGAGTCAACTTTGCCAAGAAAACTGATAAAGAAAATTTTGCAAACAAGGGAAAAGAAAAGAGACATAGGTTGGAGATGAACTTTGACAGCAATCACCTTACTGCTTTTGTGGAGGAGGAGGATGATGAAGATACAGAAAGAGAACAAAAGTTTGATGAATATGCAGAGAAAAGGCCACGCATTGTTTGGACTCAGGAGCTGCATCAGAAGTTCTTGGATGCCATTAATGTTCTGAGTGAAAGGAGTAATGTTTCTTTTTCTCTCTTGTCAACATATGTGGTTGTTACAGTTAGAGTTAGTTAA 714 0.3852 MEDRAFLPISSVPSFAQGLKILLLHNNTLSLMNLSSMLEKYSFRVTVTDEVKAAMSMICDAEEGQFNLVMAKDNMPDMDILSFLHFMLEKYIPVIFMTSEEYSDVTWKALAKGSCFFLEEPILLEDLKYVWQHVYHTRVNFAKKTDKENFANKGKEKRHRLEMNFDSNHLTAFVEEEDDEDTEREQKFDEYAEKRPRIVWTQELHQKFLDAINVLSERSNVSFSLLSTYVVVTVRVS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0894 237 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 215 IPR045279 GO:0009736
Alju12g0894 237 SUPERFAMILY CheY-like 17 140 IPR011006 -
Alju12g0894 237 SMART REC_2 19 131 IPR001789 GO:0000160
Alju12g0894 237 Gene3D - 192 228 - -
Alju12g0894 237 Gene3D - 14 138 - -
Alju12g0894 237 ProSiteProfiles Response regulatory domain profile. 20 135 IPR001789 GO:0000160
Alju12g0894 237 Pfam Response regulator receiver domain 21 127 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0894 Alju-ChrAlju12 27699752 27703663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0894 15 216 Response Regulator Gene Family AT4G16110 29.302 1.75e-28 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju12g0894 Response_reg 2.2e-07 CL0304