LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju12g0890	ATGGCAGCCTCCCATTGGTCCGACCCGGCTAACCTTTTGGATCACATCACAAAGAAGAACAATAATCCCCACTTTCTGTCTTCTTTCTTGGAGGAATTCCTATTTTATTTTCCTTTTGGGGGAAAAAAATTAAAAAATTTCTTGGGAATCAATCACGGTTTGGTTATCTTTTTCTATTATCAGGGAATAATGGAGAGAGCTTGTGAATTCTGCACATCTTTGAGGCCAGTGGTTTATTGTAAAGCAGATGAAGCATATCTTTGTCTATCCTGCGATGCAAAGGTCCATAAAGCCAATGCATTGTCCAGCCGCCACCTCAGAACTCTTGTATGTAACCTATGTAGAAACCATTTTGCTTATGTGCAGTGTTTGGATCACCGAATTTTGATCTGCCATGGCTGTGATCAGAAGCTTCATGATCCCTCCCTAAAACACCAGAAACGAGCTATCAGAAGTTATATGGGTTGCCCTTCTGCCAAAGACTTTTCTGTTCTCTGGGGTTTTGAATTAAATGAGATTGAAAGCAGTGGTTCTGTAGATTTGAATGCGGTGAATCTCTCGGAAAGGTCCGGTAATCAAACTGGAGGCCATTCAGTGGTATCGTCTGGGGCTAAATTTGATGGAGGATCTAGCAGTCAACAAGGTCAGAAATTGTACAAAGATCAAGAGAGGCAAATTATTCTGCAGCAGATTATTGATTTGAAAAGGCTTCAGATCTGTGAGAACAGTAATCAGTCTGCACTGGTAAATGTGCTGCAAGAAACAGTCTCATCTTCTCCGATGTATCATACTCGGAAGAACTATGATGAAAAATGTGATCAGCATACACAAAATCCCCAGGATTTTAATAATAATAATAATCTTCAGGAAAGAGACAGTCCCATGGCAGAGATGAAGCTTGAAAACTTGTCATCCACATTTTCTGAACTTGATAATTTACCTTCATCTACAATGATAGACCTTCCCTTAAACAGCGAGTTCTTTTGGACATGCAAAAGTACACTTCAAAGTAATCAGTTGTGGTCTCATAATATTCAAGACCTTGGGATATGTGAAGAACTAAGTTGTCAAGATGATTTTAACATACCTGATGTTGACTTAACATTCCAAAACTTTGAAGAACTATTTGGAGGAGATCAAGATCCAGTTAGAGGACTGGTTGGTGATAATGATATGTCCTGCTATTCTATAGATAAGGATATATCACTTCATAAGTCAGATATCTTCAATGAAAGAACAATGGAGGATTCTTCGGAAGCCGTATCCATTGCTATCTCCCAGTCTGCTAATGAGGACAAGGATATTGCTCCTCCAAATCAGTATGATCCAATAAACATGGAACTTCCTCAAAAAATTAGGCCATCTCATTCGACTATATCATTCTTTGTTTCAAGATTTAACCCTGGAAGCAGTTGTACTGATCACCATGAAACTGGTCTCTCTTCTCACAGTGAAGGGAAAGGAAATTCTAGCTATTTCCCAGAACTTGAAGTTTCAAACATGGAGACTGGAGGAAATGACTCTGTGAGGATTAAAGAAGAGAAATCTCAACAGCACGAAAAGCAAGCTCGAGGTCAAACCAGGAAACCTGGGGCTAATGTAAGAAAGAGGATGAAAGGCCAAACAGCCAAATCAGAAAGCTATTGA	1647	0.3947	MAASHWSDPANLLDHITKKNNNPHFLSSFLEEFLFYFPFGGKKLKNFLGINHGLVIFFYYQGIMERACEFCTSLRPVVYCKADEAYLCLSCDAKVHKANALSSRHLRTLVCNLCRNHFAYVQCLDHRILICHGCDQKLHDPSLKHQKRAIRSYMGCPSAKDFSVLWGFELNEIESSGSVDLNAVNLSERSGNQTGGHSVVSSGAKFDGGSSSQQGQKLYKDQERQIILQQIIDLKRLQICENSNQSALVNVLQETVSSSPMYHTRKNYDEKCDQHTQNPQDFNNNNNLQERDSPMAEMKLENLSSTFSELDNLPSSTMIDLPLNSEFFWTCKSTLQSNQLWSHNIQDLGICEELSCQDDFNIPDVDLTFQNFEELFGGDQDPVRGLVGDNDMSCYSIDKDISLHKSDIFNERTMEDSSEAVSIAISQSANEDKDIAPPNQYDPINMELPQKIRPSHSTISFFVSRFNPGSSCTDHHETGLSSHSEGKGNSSYFPELEVSNMETGGNDSVRIKEEKSQQHEKQARGQTRKPGANVRKRMKGQTAKSESY	548

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju12g0890	548	SMART	bboxneu5	63	110	IPR000315	GO:0008270
	Alju12g0890	548	MobiDBLite	consensus disorder prediction	472	506	-	-
	Alju12g0890	548	ProSiteProfiles	Zinc finger B-box type profile.	106	150	IPR000315	GO:0008270
	Alju12g0890	548	MobiDBLite	consensus disorder prediction	472	548	-	-
	Alju12g0890	548	CDD	Bbox1_BBX-like	67	110	-	-
	Alju12g0890	548	MobiDBLite	consensus disorder prediction	507	526	-	-
	Alju12g0890	548	PANTHER	ZINC FINGER PROTEIN CONSTANS-LIKE 10	67	545	-	-
	Alju12g0890	548	MobiDBLite	consensus disorder prediction	190	217	-	-
	Alju12g0890	548	MobiDBLite	consensus disorder prediction	426	446	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju12g0890	Alju-ChrAlju12	27596916	27601994	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju12g0890	64	383	C2C2-CO-like Transcription Factor Family	AT1G68190	39.628	7.59e-64	211