Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0886 ATGGGATTACATAACCAACTCCACGATGTATCTTCCGATTCCATTCCTCTCCTCGTCCTCCTCCACCTCGCCGCCGGCTTCAATTACCTCCGCTCCTACCTTCTCGCTTTCCTCCACTCTCTTGGCATCTCCAGATTCCACTCCCACACACCGCCCATCGTCGACGATGCCCTCCTTGCCGCCGTCGGATCCGGATTCGCCCAACTTGTGATTCTTTCCGACCAGCTCCACGACAACTATGATCTTACCGATGACGACGACGACCGTGCGATTGCCGCCACCGCCTCCTCCATGTGTGTGGTCTGCCGGAGCGAGTATGAGGAGGGCGACCAGGTAAGGAGGCTGCCCTGTCATCACGTCTTCCATAGACGCTGCTTCGATGCTTGGCTTCACCAGCTCAAGTTTAATTGTCCTCTCTGTCGATCGGCTCTCGTCTCCGAGGAGCGCGTGTCTGTCGTAGAGCGGCGCGTTGGTGGCGAAGTCTTATCATGGTTCTCTGTTCGCTGA 507 0.57 MGLHNQLHDVSSDSIPLLVLLHLAAGFNYLRSYLLAFLHSLGISRFHSHTPPIVDDALLAAVGSGFAQLVILSDQLHDNYDLTDDDDDRAIAATASSMCVVCRSEYEEGDQVRRLPCHHVFHRRCFDAWLHQLKFNCPLCRSALVSEERVSVVERRVGGEVLSWFSVR 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0886 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 156 IPR013083 -
Alju12g0886 168 PANTHER RING ZINC FINGER PROTEIN-RELATED 79 149 - -
Alju12g0886 168 SMART ring_2 99 140 IPR001841 -
Alju12g0886 168 Pfam Ring finger domain 98 141 IPR001841 -
Alju12g0886 168 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Alju12g0886 168 SUPERFAMILY RING/U-box 98 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0886 Alju-ChrAlju12 27441529 27442035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0886 1 167 C3H Transcription Factor Family AT1G15100 45.509 8.24e-42 135