Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0865 ATGTTCTCAAATTTGTTTTTTGTATTCATTGTTCGCCATCTATCTACAAGCACGAAGCTTCCGAGCATTTCAAAAATAAACCATAGGTACAAGAACTTGGCTATCCGAGAAGCCCAGAACGCTCTCACTGAATATCTCCATGGCACAAGTTGCTTGCCCTATGTTTATGCCGAGCATATTAGCAAGAACTCTCCTCTTTTGCTGGCTAGTCTCATAGAAAAGGTAGATTTTTCAGCCAGCACTTTCTCAAAAAATCTCAAGAAATTCCTCAGATACCACCCCATCAATGAGTTTGAATTTTTCTTTGAAAGCATCGGGATAGGTTATAATGACGTTTCTGAGTTGTTGCCTTCAAACAAGTTTTTCTTTTCTGAAGATCGGACTCTTCTCGATGCTGCTGCTGCGCTTTCTGAATTTGGATTTCCATGGAATGAGTTGGGAAAGTTGTATGTGGAGAGTAGTTCCATATTTATGAGTAGTGCGGAAGAGCTCAAGTCTAAGCTATCGGAGTTTGAGAAATATGGTTTTCGTAATGTTCATTTAGTTGGTATATGTTTAGCTTTCCCTTACATTTTGAGCGGGGGATGTGAAGTGAGTGCTGAAAGTGAAGCATTGTTAAATTTTCTGAAGTCGGTTTTTTTGGATTTTGAGCTGGCATTATCTGTTGAGGAAAATGTGAATTCCTGGCATAAGGTATGTAAGAAAGTTCGGGTATTTTATGATATAAGCGATGATAAGGAAAAGTTAGTGGAGCTCGTGATAAGAAATAAAAACATCTTTCTTGAACATGAGGAAGAGGTGTTGATTCAAAAGGTTGAGTATTTCCTTAGATTTGATGTAAACAAAGAGGAGGTATCTGTTTTGCTTCTTCAGAGCCCAGAATTGTGGAGTCTTAATTTAGAGAAGCCAGTGATTAACGTAATGACATTATTGGAATATTTTGGCTTGGAGATTGAAAACCTGAAGGATGTCAGTCAAGAGTATGATCATGTATTGGGAACAAACAAAATCGCTAATCTGCCTCAGGTAGTGAGGGCTTTGGACTTACACGTATGGTTCTTCAATAAAATCAAGAATGGAAATCATGAGTTGCTAATGAAATATATAGTAAGCTACCCTGATGAAGACCGAGCTGAAGAATATCAAAGAGGGTTGAAGATGATTCAGGTTTCAAGGACCCCGAATCATACCATGAGTAAACTAGATTTGTTGCATAGCTTTGGCTTTGGGGAAAATGCTTTAATCTTTGATCTCTTAGCACAAATGCATGGCACTAATATTGAATTAAAGGAAAGATTTGATTGCCTTTTGAGTTTAGGGATTGAATACTCCAAGCTTTGTAAGATGGTAAGAATGACCCCTAAGATCCTAAACCAAAATGTTAAATCTATAGAGCAGAAGGTGAGTTTCCTCTGTCAGGGAATGGAATGCTCTTTAGAGTATCTACATACATATCCAGGCTATTTGCTTTTTGGTTTAGAGAACCGCATTAAGCCTAGGTACAGATTTCATATGTGGCTTGTAGAAAAGGGTCTGTGTACCACAGACTATTCCATTGCAAGCTTAGTTGCAACTAGTGAGAAGGCTTTTCTAGCTCGTGTTTACAAAATGCACCCAGCTGCTCCAAAACATTGGTTTGAGCAATTCCGCCCAACCTTCAATCCTGAAGAGATCTCTGGTAGGGTTATGACGGCTGAATTTGGTGGATTGCCGATATAG 1719 0.3869 MFSNLFFVFIVRHLSTSTKLPSISKINHRYKNLAIREAQNALTEYLHGTSCLPYVYAEHISKNSPLLLASLIEKVDFSASTFSKNLKKFLRYHPINEFEFFFESIGIGYNDVSELLPSNKFFFSEDRTLLDAAAALSEFGFPWNELGKLYVESSSIFMSSAEELKSKLSEFEKYGFRNVHLVGICLAFPYILSGGCEVSAESEALLNFLKSVFLDFELALSVEENVNSWHKVCKKVRVFYDISDDKEKLVELVIRNKNIFLEHEEEVLIQKVEYFLRFDVNKEEVSVLLLQSPELWSLNLEKPVINVMTLLEYFGLEIENLKDVSQEYDHVLGTNKIANLPQVVRALDLHVWFFNKIKNGNHELLMKYIVSYPDEDRAEEYQRGLKMIQVSRTPNHTMSKLDLLHSFGFGENALIFDLLAQMHGTNIELKERFDCLLSLGIEYSKLCKMVRMTPKILNQNVKSIEQKVSFLCQGMECSLEYLHTYPGYLLFGLENRIKPRYRFHMWLVEKGLCTTDYSIASLVATSEKAFLARVYKMHPAAPKHWFEQFRPTFNPEEISGRVMTAEFGGLPI 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0865 572 Pfam mTERF 400 531 IPR003690 GO:0003690|GO:0006355
Alju12g0865 572 Pfam mTERF 219 334 IPR003690 GO:0003690|GO:0006355
Alju12g0865 572 PANTHER CGI-12 PROTEIN-RELATED 141 536 IPR003690 GO:0003690|GO:0006355
Alju12g0865 572 Gene3D Transcription termination factor 3, mitochondrial 221 353 IPR038538 -
Alju12g0865 572 Gene3D Transcription termination factor 3, mitochondrial 361 550 IPR038538 -
Alju12g0865 572 Gene3D Transcription termination factor 3, mitochondrial 68 220 IPR038538 -
Alju12g0865 572 SMART mt_12 413 442 IPR003690 GO:0003690|GO:0006355
Alju12g0865 572 SMART mt_12 447 478 IPR003690 GO:0003690|GO:0006355
Alju12g0865 572 SMART mt_12 147 177 IPR003690 GO:0003690|GO:0006355
Alju12g0865 572 SMART mt_12 479 513 IPR003690 GO:0003690|GO:0006355
Alju12g0865 572 SMART mt_12 250 281 IPR003690 GO:0003690|GO:0006355
Alju12g0865 572 SMART mt_12 286 317 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0865 Alju-ChrAlju12 26713323 26715570 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Alju12g0865 mTERF 9.7e-18 No_clan