Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0839 ATGAGGCGCCAAATGTTCGGAGGCAATGGTCTGGGCCACGTCATCGCCGTGGCGGCCGTTACTCTCCTCGTCCGCCTATTCTCTTCTAGTCCTGCCCCTGCCGCACTCTTGCCGGAAAATGAGAATGAGGACCCCTCCAATAAGGAGGAGAAGGATGCTGACGACGGCGGTGAAGCTCCGGTCTCCGGTAAAATTTCTCCAGTAACAGTCCGTTGGAGCAATATCACGTGTTCCCTTTCCCGTAAATCCTCCGAGCCTGTGAAGTTTTTGCTTAAAAATGTGAGTGGGGAAGCGCAACCTGGAAGGCTATTAGCTATAATGGGGCCGTCAGGTTCAGGAAAAACTATGTTGCTCGATGTTCTTGCAGGCCAGCTGGCAGCATCGCCTCAGCTGCATTTGTCAGGTCTTCTGGAGTTCAATGGAAAGCCAAGTTCAAACAAAACATCCAAGTTTGCTTGTGTAAGACAGGAAGATTTACATTTTTCTCAGCTGAAAGTGCGGGAAACATTGTCTCTTGCTTCAGAACTACAGCTTCCTAGCACTTCTGTTGAAGAGAGAGATGAATATGTGGATAATCTTCTGTTCAAGCTAGGCCTGGTCAGTTGTGCTGATACTGAAGTTCGTGGAATTAATGCCGGCGAAAAGAAGCGCCTAACTCTTGCTTGTGAGCTGATTGCATGCCCATCTGTTATATTTGCTGATGAACCCACCACTGGACTTGATGCCTTCCAAGCTGAGAAAGTCATAGAGACTCTTCTAAACCTGGCACATGATGGTCATACAGTAATTTGCTCTATACGTCAGCCAAGAGGTTCAGTGTATAACAAATTGGACGACATTGTCTTGCTAACAGAGGGTTCAATTATTTATGCTGGTCCTGCTCATAAAGAAATATTGACTTACTTCTCAAAATTTGGGTACCACTGCCCAGATCATGTGAATCCTGCTGAATTTTTGGCTGATCTTATATCCATTGACTATAGTTCTGCCGAAAGTGTCCATTCCTCCCAAAAAAGAGTTGATGGTCTTGTAGATTCATTCTCACAGAGGCTGCCTACAATAGTTTATGCAACTCCAATTACAAGAGATGAGCTCTCCAAAAGTGGAAAGAAAATGAGCAAAAGAACTATATCTAAGAAGAAAGGAGGTTGGTGCAAACAATTCTGGTTGCTCCTCAAGAGAGCATGGATACAGGTTTTCCGTGATGGACCAACAAACCAAGTTTGGGCAAAAATATCATTTACATCAGCAGTTACATTTGGGTCTGTTTTCTGGAAAATGGGAAGATCTCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTTGCTGCAATAAGCACAGCTATGGCGGCTCTCACAAAGACTATAGGGGTGTTTCCAAAGGAACGTGCAATTGTAGATAGAGAACGTACCAAGGGCTTATATGACTTGGGTCCTTATCTTCTTTCAAAATTGTTGGCAGAGATTCCCATTGGAGCAGTATTTCCATTAACATTTAGTGCTATTTTGTACCCCATGGCGCATCTTCATCCTACTTTACTAAGATTTGGCAAATTCTGTGGTATTGTCACTATGGAATCTTTTGCTGCATCCGCAATGGGACTTGCTTTAGGGGCTATGGTTCCAACCACTGATTCAGCAATTGTAGTGGGTCCCTCTCTTATGACAATTTTTGTTGTATTTGGAGGCTACTACGTCAATCATGAGAATACTCCAATCATCTTTCACTGGATTCCACGTGTTTCTCTTATTAGATGGGCCTTTCAGGGACTTTGCGTCAATGAGTTCTGGGATCTTCAATTTGATCATCACCATCCATTTGATGTTCAAACTGGAGAACAGGCACTAGAGCGCATATCCTTTGGAGGAGTTAGGATCAAGGATACGGTGATAGCACAAAGCAGAATTCTGGTATTTTGGCATTGCACTACCTACTTTCTCTTAAAGATAAACAAGCCCAAGTACCAGCAACTTGAGCCACCCCTTTATCCCAACAAGTCCCACGTAAAACTTGAAGAGTTAAACCCTGAATATGTTGATCAGCCTCTTGTTTCTTCATCAGCCAGTCAAGTTGAATCCAACCTGTGCCTTCATTCTCCTCAACCTGATCTTATTGGACCCTTTGTCCTAGAAGGACTGTAA 2145 0.4387 MRRQMFGGNGLGHVIAVAAVTLLVRLFSSSPAPAALLPENENEDPSNKEEKDADDGGEAPVSGKISPVTVRWSNITCSLSRKSSEPVKFLLKNVSGEAQPGRLLAIMGPSGSGKTMLLDVLAGQLAASPQLHLSGLLEFNGKPSSNKTSKFACVRQEDLHFSQLKVRETLSLASELQLPSTSVEERDEYVDNLLFKLGLVSCADTEVRGINAGEKKRLTLACELIACPSVIFADEPTTGLDAFQAEKVIETLLNLAHDGHTVICSIRQPRGSVYNKLDDIVLLTEGSIIYAGPAHKEILTYFSKFGYHCPDHVNPAEFLADLISIDYSSAESVHSSQKRVDGLVDSFSQRLPTIVYATPITRDELSKSGKKMSKRTISKKKGGWCKQFWLLLKRAWIQVFRDGPTNQVWAKISFTSAVTFGSVFWKMGRSQTSIQDRMGLLQVAAISTAMAALTKTIGVFPKERAIVDRERTKGLYDLGPYLLSKLLAEIPIGAVFPLTFSAILYPMAHLHPTLLRFGKFCGIVTMESFAASAMGLALGAMVPTTDSAIVVGPSLMTIFVVFGGYYVNHENTPIIFHWIPRVSLIRWAFQGLCVNEFWDLQFDHHHPFDVQTGEQALERISFGGVRIKDTVIAQSRILVFWHCTTYFLLKINKPKYQQLEPPLYPNKSHVKLEELNPEYVDQPLVSSSASQVESNLCLHSPQPDLIGPFVLEGL 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0839 714 SMART AAA_5 100 295 IPR003593 GO:0016887
Alju12g0839 714 Gene3D - 66 305 IPR027417 -
Alju12g0839 714 Pfam ABC-2 type transporter 387 597 IPR013525 GO:0016020|GO:0140359
Alju12g0839 714 FunFam ABC transporter G family member 7 68 300 - -
Alju12g0839 714 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 301 IPR027417 -
Alju12g0839 714 MobiDBLite consensus disorder prediction 35 64 - -
Alju12g0839 714 MobiDBLite consensus disorder prediction 42 58 - -
Alju12g0839 714 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 70 310 IPR003439 GO:0005524
Alju12g0839 714 CDD ABCG_EPDR 67 292 - -
Alju12g0839 714 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 52 606 - -
Alju12g0839 714 Pfam ABC-2 type transporter 268 324 IPR043926 GO:0140359
Alju12g0839 714 Pfam ABC transporter 91 237 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0839 Alju-ChrAlju12 25970808 25988826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0839 84 300 Calmodulin-binding Proteins AT2G36910 26.549 1.89e-08 56.2