Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0718 ATGGAGGACTATCAGAACAGCGACGATGATTACCAATACTCTGATCAGGGTTCCCCGAACGACTGCGCATGTGAGGAGGAGCTCGATTTTAAATTGGTCGATGGCACTGCCAAGGGTCCCACAATTAAGGATAAGGAGAAATTATCTGCGGAGTTTGTGGAAAAGGGGAAGACGTTACTCTTGGCTGAAGCTGGTGTTAGTGAAGAACACAGTGATTCAGGCTCATTAGTTGCTTCTTCAATAATGTGTGCAATCTGCTTTGAGGTTGTTCCCTGTGATCGAGCAACAAGAATGGACTGTGGTCACTGTTTTTGCAACAGCTGTTGGACAGGATATTTCATTTTCGTGATAAATGAAGGTCAAAGTAAACACATTAGATGCATGGCACACGGATGCAAATATTATTGCAATGAGGATGTTCTAGGTGGTGGTGACTACGAAGAACAGGAGGAAAATGATGAAGAGGGAAAGCAGGATGAAAGTCGTTTTGTGCGCTATTATCATCGTTTTAAAGCTCATATGAGGAACTGCTCAGATAAAGAATGTAGATTGACAGAGTCTATAGGAAAGAAGGCTTATGTCCTTGGAGACAGAAGCTGGGTAAATGATGGACTCTCCACACTTGTCAGGTCTTGGCGAGTCCTATCATTCTCATATCCATTTTCATTTTATATGTTTAATGATGAAATGTCAGACGAGGAAATGATAAGAAAACAAAACGTATTTGAGCTTTATCAGCAGCAGCTTGAGGAAAATTTTAAGAAGCTCGCTGAAATTTTGGAAATGCCCTTTGAAAGTAATAATGTTTCGGATACAAGGATGCGGGTTATCAATTTGTCAGTAGTTATTGACATGTTTTGTGAGGGAGTGTATGAGTTCATCCAGGAAGACTTATTGGGTTCTCTCTCACTTGGCCCTCACAGGATAGCTCCATACAAGTTATTGAAGCCATGA 954 0.413 MEDYQNSDDDYQYSDQGSPNDCACEEELDFKLVDGTAKGPTIKDKEKLSAEFVEKGKTLLLAEAGVSEEHSDSGSLVASSIMCAICFEVVPCDRATRMDCGHCFCNSCWTGYFIFVINEGQSKHIRCMAHGCKYYCNEDVLGGGDYEEQEENDEEGKQDESRFVRYYHRFKAHMRNCSDKECRLTESIGKKAYVLGDRSWVNDGLSTLVRSWRVLSFSYPFSFYMFNDEMSDEEMIRKQNVFELYQQQLEENFKKLAEILEMPFESNNVSDTRMRVINLSVVIDMFCEGVYEFIQEDLLGSLSLGPHRIAPYKLLKP 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0718 317 ProSiteProfiles Zinc finger RING-type profile. 83 130 IPR001841 -
Alju12g0718 317 FunFam RBR-type E3 ubiquitin transferase 77 153 - -
Alju12g0718 317 Pfam Ariadne domain 147 313 IPR045840 -
Alju12g0718 317 SUPERFAMILY RING/U-box 80 137 - -
Alju12g0718 317 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 54 168 IPR031127 GO:0004842|GO:0016567
Alju12g0718 317 Gene3D - 83 299 - -
Alju12g0718 317 CDD RING-HC_RBR_TRIAD1 82 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0718 Alju-ChrAlju12 16567061 16568503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0718 147 313 ARIADNE family AT2G16090 47.802 4.11e-44 155