Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0705 ATGGAACAGAAAGGCTTGTTGATCTCAGCGTTAAGTGTTGGTGTAGGAGTTGGAGTGGGCATTGGGTTGGCTTCTGGCCAAAACGTAAGCAAATGGGGAGCTAATACTTGTTCCTCAAACGCCCTTACTGTGGAAAAGATAGAGCAAGAAATGCTTCGATTAGTTGTTGATGGCAGAGAAACCAAAGTCACCTTCGATCAGTTTCCTTATTATCTTAGTGAGCAGACACGCGTGTTGCTGACAAGTGCCGCTTATGTCCATTTAAAAAATGCCGAGGTCTCTAAATTTACGCGTAACCTTTCTCCCGCAAGCCGCACTATTCTACTCTCTGGACCAGCAGAACTTTACCAACAGGTGCTTGCCAAGGCTTTAGCTCATTACTTTGAAGCAAAGTTGCTGCTGTTAGATTTAACCGACTTTTTGTTGAAGATTCAAAGCAGATATGGTTCTGGCAACAAAGAACCCGTTTTTAAAAGGTCCACTTCAGAGTCAACTTTGGAGAGACTATCTGGCTTATTTGGGTCATTTTCAATTTTTCCTCAGAAGGAGGAACCTAAAGGAAAAATCATCAGACAAAGCAGTGGAGTGGACTTCAGATCAATGGGGGGTGATGGGTCTTGCAATCCTCCTAGCATTCGTCGGAATGCTTCTGCCTCTGCAAATATGAGTAACCTTGCCTTGCAAAATACTCCATCTAATTCAGGTTCTCTTAGGCGCACAACCAGTTGGTCTTTTGATGAAAAGCTTCTTATTCAATCTCTTTACAAGGTTCTCATTTATGTGTCAAAAACTTATCCCATAGTGCTGTATCTGCGGGATGTTGAGAAGTTGCTTAATAGATCACAAAGGACTTATAAGTTGTTTCAAAAAATGTTGGAGAAACTATCTGGACCAGTCCTGATTCTCGGTTCTCGAGTTCTGGATCCTGGTAATGACTACAGTGAGGTAGATGAGAAAATTGCTTCAGTCTTCCCGTACAACATTGAAATTAGACCTCCAGATGATGAATCACATCTTGTAAGCTGGAAGACTCAACTAGAAGAAGATATGAAAAAGATACAGGTTCAGGATAATAAAAATCATATTTTGGAAAAACTTTCAGCCAATGATCTTGATTGTGATGATCTAGATTCCATATGTGTGGCAGACACAATGATTCTTAGTAATTACGTAGAAGAGATTGTTGTTTCAGCAATTTCATATCACTTAATGAGAAACAAAGACCCAGAGTACAGAAATGGGAAACTTGTTATTTCATGTAGCAGTTTATCTCAAGCATTAAGTATATTCCAAGAGGGAAAATCCAATGGAAGGGATACATTAAAATTGGAAGCCCAAGATATGACATCTGAGGAAAGAGGGGAAGGTGCTGCTGTGAAACCTGAAGCCAAGTGTGAAAACCGAGCTCCAGAAAAGAAAACCGAAGAAGCAGCAGCAGCTTCAGTGGCAAAGGTTGAGAATGCAACTTCAGCTCCTCCAGAACCCAAAGTTGCTGAAACTCCTCCAGATAATGAGTTTGAGAAGCGAATAAGGCCAGAGGTAATACCAGCAAATGAGATTAATGTGACATTTGCTGATATTGGTGCCTTAGAAGATACTAAAGAATCCCTTCAAGAACTAGTGATGCTTCCACTACGAAGGCCAGACCTTTTCACCGGTGGTCTTCTGAAGCCTTGTAGAGGAATATTGCTGTTTGGTCCACCTGGCACAGGAAAGACAATGTTGGCTAAGGCCATTGCAAGGGAGGCTGGAGCAAGCTTTATCAATGTATCTATGTCTACCATAACATCCAAATGGTTTGGTGAAGACGAAAAGAATGTTCGAGCTTTGTTCACATTGGCAGCTAAGATCTCACCAACTATTATATTTGTTGATGAGGTCGATAGCATGCTTGGCCAACGCACAAGAGTTGGAGAGCATGAAGCCATGAGGAAAATAAAGAATGAATTCATGACTCACTGGGATGGCCTTGTGACAAAGCCAGATCAGCGCATTCTTGTTCTTGCTGCAACCAATAGGCCCTTTGATCTAGATGAAGCCATTATCAGGAGATTTGAAAGAAGAATTATGGTAGGGCTTCCATCTGCAGACAACAGGGAAAAGATTTTGAGGACTCTCTTGGCAAAAGAAAAGGTAGATGATCAGCTTGACTTAAAGGAATTAGCAACTATGACAGAAGGTTATACTGGAAGTGATTTGAAGAACCTTTGCACAACTGCTGCTTACCGGCCTGTACGAGAGTTAATTCAGCAAGAGAGACAGAGGACTCTGAAGAAGAAGCATAAAGCTGCTAATGTAGATGTCCGTGGTAGACAAGGGGAACAATCAACTGCAGAAAATGCCCCAGATGCTGTGAATGCAAAAGAGGAAGTTGAACAGGAAAGAATTATTGTCCTTAGGCCATTGAATATGCAGGACTTCAAAGAGGCGAAAAATCAGTTTGCGGCAAGCTTTGCAGCCGAGGGAGCGGGAATGAATGAGTTGAAGCAGTGGAATGACTTGTATGGGGAAGGCGGATCCAGGAAGAAACAGCAATTAACTTACTTCCTATGA 2553 0.4191 MEQKGLLISALSVGVGVGVGIGLASGQNVSKWGANTCSSNALTVEKIEQEMLRLVVDGRETKVTFDQFPYYLSEQTRVLLTSAAYVHLKNAEVSKFTRNLSPASRTILLSGPAELYQQVLAKALAHYFEAKLLLLDLTDFLLKIQSRYGSGNKEPVFKRSTSESTLERLSGLFGSFSIFPQKEEPKGKIIRQSSGVDFRSMGGDGSCNPPSIRRNASASANMSNLALQNTPSNSGSLRRTTSWSFDEKLLIQSLYKVLIYVSKTYPIVLYLRDVEKLLNRSQRTYKLFQKMLEKLSGPVLILGSRVLDPGNDYSEVDEKIASVFPYNIEIRPPDDESHLVSWKTQLEEDMKKIQVQDNKNHILEKLSANDLDCDDLDSICVADTMILSNYVEEIVVSAISYHLMRNKDPEYRNGKLVISCSSLSQALSIFQEGKSNGRDTLKLEAQDMTSEERGEGAAVKPEAKCENRAPEKKTEEAAAASVAKVENATSAPPEPKVAETPPDNEFEKRIRPEVIPANEINVTFADIGALEDTKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAREAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKISPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLVTKPDQRILVLAATNRPFDLDEAIIRRFERRIMVGLPSADNREKILRTLLAKEKVDDQLDLKELATMTEGYTGSDLKNLCTTAAYRPVRELIQQERQRTLKKKHKAANVDVRGRQGEQSTAENAPDAVNAKEEVEQERIIVLRPLNMQDFKEAKNQFAASFAAEGAGMNELKQWNDLYGEGGSRKKQQLTYFL 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0705 850 ProSitePatterns AAA-protein family signature. 665 684 IPR003960 GO:0005524|GO:0016887
Alju12g0705 850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 521 815 IPR027417 -
Alju12g0705 850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 367 IPR027417 -
Alju12g0705 850 MobiDBLite consensus disorder prediction 447 507 - -
Alju12g0705 850 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 45 849 - -
Alju12g0705 850 MobiDBLite consensus disorder prediction 447 479 - -
Alju12g0705 850 Gene3D - 694 778 - -
Alju12g0705 850 SMART AAA_5 558 695 IPR003593 GO:0016887
Alju12g0705 850 Pfam AAA+ lid domain 716 757 IPR041569 -
Alju12g0705 850 Pfam ATPase family associated with various cellular activities (AAA) 562 692 IPR003959 GO:0005524|GO:0016887
Alju12g0705 850 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 521 696 - -
Alju12g0705 850 Gene3D - 521 779 IPR027417 -
Alju12g0705 850 MobiDBLite consensus disorder prediction 759 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0705 Alju-ChrAlju12 15321891 15329637 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0705 522 752 Calmodulin-binding Proteins AT3G56690 38.983 9.62e-42 163