Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0678 ATGGATGGGAGAGAAGGTATGGCATTCTCTGGTGGCTCAGCTCCTTATTACATGCATAGAGGAAATGTTTCTGGGTCTGGCTCGGGAACACAAGCCCAGGGGTTCCAACAATCACCTCCTGGGTTTAGACCTTTGTCAGACGTTGGCTTTCAAGCTCAGTCTAATGTCCGAGGTGGTTCTGTGGGATCCACATTTTCAGTAGAGCCTCCTCGTAGCAATTTTAGTCAAGCCTTTAACATAAGTTCTTCTCCTGGAGGAGTGCCTTCTTCAGGCGAGCCCTTGAAAAAGAAGAGAGGAAGGCCTCGTAAATATGGTCCTGATGGCCCTGTTTCTTTTGGACTGTCTCCCATGTCTGCAACTGCTAATTCTACCCCAGGTTCAGGCACACCTTCCCAGAAGCGGAATAGAGGACGTCCACCTGGTTCTGGCAGGAAGCAGCAGCTAGCGACTCTAGGTGAATGGATGAACAGTTCGGCTGGACTTGCTTTTGCTCCTCATGTTATCACCATTGGAATTGGGGAGGACATTGTAGCAAAGTTGTTGTCTTTATCACAGCAAAGACCAAGGGCTCTGTGCATCATGTCGGGTACTGGTGCAGTTTCTTCTGTCACTCTACGCCAACCTGCTTCAACAAACATCAGTCTCACTTATGAGGGCCGATTTCAAATTTTATGCTTGTCAGGTTCATACTTGGTTGCTGAAGATGGTGGTCCTCATGATAGAACAGGGGGTTTGAGTGTTTCTCTTGCTAGCCCTGATGGTCAAGTTATTGGTGGCGGTGTTGCTGTGCTTATTGCTGCAAGCCCAGTTCAGGTGGTGGTGTGCAGTTTTGTATATGGAAGCGCTAAGATGAAGACAAAGCAAGTAACCTCTCCAAAAGCTGAGAAGAATTCTGAGCCTAAGACTCAGACTCAAACTCAGCCTCAGCCTCAGCCTCAGCGTGATGCTAACAAGTTAAATAGCCCTATTACTTCAGCAAGTGCCCAAAACTACACATTATCTGCATCAGCCATGTGGCCAGAAGACCTGAAAGGTTCACACACACATTCTCATACCGGTATCGACTTGACCCGTGGCTGA 1080 0.4806 MDGREGMAFSGGSAPYYMHRGNVSGSGSGTQAQGFQQSPPGFRPLSDVGFQAQSNVRGGSVGSTFSVEPPRSNFSQAFNISSSPGGVPSSGEPLKKKRGRPRKYGPDGPVSFGLSPMSATANSTPGSGTPSQKRNRGRPPGSGRKQQLATLGEWMNSSAGLAFAPHVITIGIGEDIVAKLLSLSQQRPRALCIMSGTGAVSSVTLRQPASTNISLTYEGRFQILCLSGSYLVAEDGGPHDRTGGLSVSLASPDGQVIGGGVAVLIAASPVQVVVCSFVYGSAKMKTKQVTSPKAEKNSEPKTQTQTQPQPQPQRDANKLNSPITSASAQNYTLSASAMWPEDLKGSHTHSHTGIDLTRG 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0678 359 Pfam Plants and Prokaryotes Conserved (PCC) domain 165 278 IPR005175 -
Alju12g0678 359 MobiDBLite consensus disorder prediction 48 88 - -
Alju12g0678 359 SUPERFAMILY AF0104/ALDC/Ptd012-like 163 283 - -
Alju12g0678 359 ProSiteProfiles PPC domain profile profile. 157 299 IPR005175 -
Alju12g0678 359 MobiDBLite consensus disorder prediction 286 327 - -
Alju12g0678 359 MobiDBLite consensus disorder prediction 295 327 - -
Alju12g0678 359 MobiDBLite consensus disorder prediction 1 146 - -
Alju12g0678 359 CDD DUF296 165 277 IPR005175 -
Alju12g0678 359 Gene3D - 165 296 - -
Alju12g0678 359 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 69 327 IPR039605 GO:0003680
Alju12g0678 359 MobiDBLite consensus disorder prediction 23 40 - -
Alju12g0678 359 MobiDBLite consensus disorder prediction 115 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0678 Alju-ChrAlju12 13070854 13075111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0678 1 359 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 48.586 3.31e-97 291