Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0664 ATGGGATCCACTTCGACGACCAAGTTTACGAAGCACAATTACTTGAGAAGCTTCAGTAATTTCAATTTCCAGTGCTGCGGCAATCTGTCGCCGGAGCCACACTATCCGTCGATGACGAGATATCCAAGAGGCTCCTCGCCGGAAGAGGTGTTGAGTTCGCCGGAGGCCAAAGCAGTTTTCAACGTCACCGGAATGACGTGCGCCGCCTGCGCTGGGTCGGTGGAGAAGGCCGTGAAACGCCTCCCCGGAATTCGCGACGCCGTCGTCGATGTCTTGAACGATAAAGCTCTGGTTCGTTACTTTCCGGCGATGGTTACCGAGGAAAGAATAAAAGAGGCCATTGAAGAAGCTGGATTTGAAGCGAAGTCCATTGAAGAAGAATCAAACCAGAAACCTTCTCAAATCTGCAGAATACACATAAAGGGTATGACTTGTACTTCTTGCTCCTCCACTATTGAATCCCTCCTTCAAGCCATTCCTGGAGTTCAGAAATCACAAGTGGCTTTGGCAACTGAAGAAGCTCAAGTCCATTATGACCCAAACATTGTCACCTACAATCACCTAAAGGAAGCCATTGAAGATGCAGGATTTGAAGCCATACTGATAAGCACAGGTGAACACATAAGCAAAATAGAGTTGAAAATTGAGGGCCTAAAAACTGATCAGTCCTTGAGGGAGATTCAAAAGTCTCTCCAGTCACTTCCAGGAGTTGAAAACATAGACATTAATCAAGAAATGAACAAGGTTTCTATTTCTTATAAACCCTACATGACAGGACCCAGAACTTTCATTGAAGTCATAGAATCATCTTCAGGCTCTGGGTGTTTCAGGGCCATGATATTTCCTGATGGAGGAGGAAGAAGAGAGACTCATAGGCAAGACGAAATCAAGAAACACTTCAAGTTATTCATATGGAGTTTGGCTTTCTCCATTCCTGTATTTCTAACCTCCATGGTCCTTATGCATATTCCTGGAATTATGCATGTTTTAGATATGAAAGTTGTGAATAACTTAACTATTGGACTCCTCATGAGATGGGAATTTTCGACCCCGGTACAGTTCTACATAGGAAGAAGATTCTACATTGGGGCTTACAAATCTTTGCACAATGGTTCGGCTAACATGGACGTACTGATTGCCTTGGGAACAAACACGGCTTACTTCTATTCTGTCTATGTTGCAGTTAGAGCTGCTTTATCCAGAGACTTCATGGGCAGTGATTTTCTTGAGACCAGTTCTATGCTTATCTCATTTATTCTTTTAGGCAAGTATCTGGAAGTGTTGGCCAAGGGAAAGACATCACAAGCCATTGCCAAACTCATGGAATTGACTCCTGACACAGCAATATTGTTAAGTCTAAATGAGGAAGGCAATAATGTAACAAGTGAACAGAAAATAGATAGCAGGTTGATACAAAAAGATGATGTGATAAAGATCGTACCTGGAGCCAAAGTGGCATCAGACGGTTTTGTGATTTGGGGACAGAGTTACATAAATGAGAGCATGATAACAGGAGAAGCCAGGCCTGTGGCAAAGAGGAAAGGTGACATGGTGATTGGAGGCACTGTGAATGGCAATGGCGTTTTGCATGTGAAGGTGACAAGAGTTGGATCAGAGAGTGCTCTCTCGCAGATTGTTCGGCTTGTTGAATCAGCTCAGATGGCTAAAGCTCCGGTTCAGAAGCTAGCAGACCGAATTTCCAAATACTTTGTGCCACTGGTTATAATGCTTTCTCTTGCAACTTGGGTGTCCTGGTTCATAGCTGGACAATTATATGCATACCCGGAATCTTGGATTCCATCCTCCATGAACAGCTTTGAGCTTGCACTTCAGTTTGGGATCTCTGTGATGGTCATAGCCTGTCCTTGTGCTTTAGGCCTAGCCACTCCTACAGCTGTCATGGTTGGTACTGGAGTTGGTGCAACTCAAGGCGTGTTGATCAAAGGTGGCCAAGCATTAGAAAAGGCACATAAGGTGAATTGCATTGTCTTCGATAAGACGGGAACTCTAACAGTTGGGAAGCCAGTCGTTGTCATCACAAAACTCTTCAAGAAGATAACTCTCCCAGATTTCTACACATTTGTTGTTGCCACTGAGGTGAACAGTGAGCACCCAATAGCCAAGGCCATTGTTGAGCATGCTGAGAAAGCAGCAGAAGGTGATGAAAAGAACCCTGTATGGCCAGAGGCACGTGACTTTGTTTCCATTTCAGGCCATGGAGTGAAGGCCGTAGTTCAAGACAAGGAAATAATAGTTGGGAATAAGAAGTTGATGCAGGAACATAACATAGTCATTCCAGTGGATGCTGAAGAAACACTAGCAGAGGCTGAAAGGTTGGCACAAACTGGAATTCTAGTTTCCATTGATAGAGAAATTGCAGGAGTTCTAGCAATATCTGACGCACTGAAACCAAGTGCCAAAGAAGTCATTTCCGTTCTTAACTCCATGAAAATCAAGAGTGTCCTCGCGACAGGCGATAACTGGGGAACTGCAAACTCCATTGCCAGACAAGTGGGGATTGAAGCTGTCATAGCTGAAGCACAGCCTGAGGTTAAAGCAGACAAAGTAAAAGAATTGCAGACTTCTGGTTACACCGTGACAATGGTGGGAGATGGTATCAATGATTCGCCGGCGCTTGTGGCTGCTGATGTGGGAATGGCAATTGGTGCTGGCACAGATATTGCTATTGAGGCAGCTGACATAGTGCTCATGAAGAGCAACTTAGAAGACATAATAATTGCCATTGATCTTGCCAAGAAAACTTTCTCCAGGATTCGTCTAAACTACATTTGGGCTCTGGGATACAATCTACTGGCAATTCCAGTGGCTGCTGGAATCCTTTACCCATCTACTGAATTCCGGTTACCACCATGGATCGCCGGAGCTGCAATGGCAGCATCTTCCGTCAGTGTTGTCTGCTCCTCCCTCTTGTTGAAGAACTACAGAAGACCCCAGAAGCTGAATAACCTGGACATAAATGGTATTAAGATTGAATAA 2997 0.4458 MGSTSTTKFTKHNYLRSFSNFNFQCCGNLSPEPHYPSMTRYPRGSSPEEVLSSPEAKAVFNVTGMTCAACAGSVEKAVKRLPGIRDAVVDVLNDKALVRYFPAMVTEERIKEAIEEAGFEAKSIEEESNQKPSQICRIHIKGMTCTSCSSTIESLLQAIPGVQKSQVALATEEAQVHYDPNIVTYNHLKEAIEDAGFEAILISTGEHISKIELKIEGLKTDQSLREIQKSLQSLPGVENIDINQEMNKVSISYKPYMTGPRTFIEVIESSSGSGCFRAMIFPDGGGRRETHRQDEIKKHFKLFIWSLAFSIPVFLTSMVLMHIPGIMHVLDMKVVNNLTIGLLMRWEFSTPVQFYIGRRFYIGAYKSLHNGSANMDVLIALGTNTAYFYSVYVAVRAALSRDFMGSDFLETSSMLISFILLGKYLEVLAKGKTSQAIAKLMELTPDTAILLSLNEEGNNVTSEQKIDSRLIQKDDVIKIVPGAKVASDGFVIWGQSYINESMITGEARPVAKRKGDMVIGGTVNGNGVLHVKVTRVGSESALSQIVRLVESAQMAKAPVQKLADRISKYFVPLVIMLSLATWVSWFIAGQLYAYPESWIPSSMNSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGQALEKAHKVNCIVFDKTGTLTVGKPVVVITKLFKKITLPDFYTFVVATEVNSEHPIAKAIVEHAEKAAEGDEKNPVWPEARDFVSISGHGVKAVVQDKEIIVGNKKLMQEHNIVIPVDAEETLAEAERLAQTGILVSIDREIAGVLAISDALKPSAKEVISVLNSMKIKSVLATGDNWGTANSIARQVGIEAVIAEAQPEVKADKVKELQTSGYTVTMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDIIIAIDLAKKTFSRIRLNYIWALGYNLLAIPVAAGILYPSTEFRLPPWIAGAAMAASSVSVVCSSLLLKNYRRPQKLNNLDINGIKIE 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0664 998 FunFam Copper-transporting ATPase 1, putative 430 553 - -
Alju12g0664 998 Gene3D - 133 204 - -
Alju12g0664 998 SUPERFAMILY HMA, heavy metal-associated domain 206 269 IPR036163 GO:0046872
Alju12g0664 998 CDD P-type_ATPase_Cu-like 303 965 - -
Alju12g0664 998 ProSitePatterns Heavy-metal-associated domain. 62 91 IPR017969 GO:0046872
Alju12g0664 998 SUPERFAMILY Calcium ATPase, transmembrane domain M 412 654 IPR023298 -
Alju12g0664 998 SUPERFAMILY HAD-like 662 975 IPR036412 -
Alju12g0664 998 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 26 993 - -
Alju12g0664 998 ProSiteProfiles Heavy-metal-associated domain profile. 134 200 IPR006121 GO:0046872
Alju12g0664 998 PRINTS Copper-transporting ATPase signature 360 379 - -
Alju12g0664 998 PRINTS Copper-transporting ATPase signature 432 450 - -
Alju12g0664 998 PRINTS Copper-transporting ATPase signature 942 956 - -
Alju12g0664 998 PRINTS Copper-transporting ATPase signature 646 661 - -
Alju12g0664 998 PRINTS Copper-transporting ATPase signature 846 863 - -
Alju12g0664 998 PRINTS Copper-transporting ATPase signature 412 431 - -
Alju12g0664 998 NCBIfam heavy metal translocating P-type ATPase 375 978 IPR027256 GO:0006812|GO:0016020|GO:0019829
Alju12g0664 998 SUPERFAMILY HMA, heavy metal-associated domain 133 206 IPR036163 GO:0046872
Alju12g0664 998 CDD HMA 140 199 IPR006121 GO:0046872
Alju12g0664 998 FunFam Probable copper-transporting ATPase HMA5 777 926 - -
Alju12g0664 998 SFLD p-type atpase 645 920 IPR044492 -
Alju12g0664 998 Pfam E1-E2 ATPase 462 641 - -
Alju12g0664 998 Pfam haloacid dehalogenase-like hydrolase 659 883 - -
Alju12g0664 998 Gene3D - 750 800 IPR023299 GO:0000166
Alju12g0664 998 Gene3D - 670 749 IPR023299 GO:0000166
Alju12g0664 998 PRINTS P-type cation-transporting ATPase superfamily signature 794 805 - -
Alju12g0664 998 PRINTS P-type cation-transporting ATPase superfamily signature 499 513 - -
Alju12g0664 998 PRINTS P-type cation-transporting ATPase superfamily signature 816 826 - -
Alju12g0664 998 PRINTS P-type cation-transporting ATPase superfamily signature 892 904 - -
Alju12g0664 998 PRINTS P-type cation-transporting ATPase superfamily signature 869 888 - -
Alju12g0664 998 PRINTS P-type cation-transporting ATPase superfamily signature 663 677 - -
Alju12g0664 998 PRINTS Copper-transporting ATPase 1 signature 112 132 - -
Alju12g0664 998 PRINTS Copper-transporting ATPase 1 signature 158 179 - -
Alju12g0664 998 PRINTS Copper-transporting ATPase 1 signature 57 82 - -
Alju12g0664 998 PRINTS Copper-transporting ATPase 1 signature 83 106 - -
Alju12g0664 998 ProSiteProfiles Heavy-metal-associated domain profile. 56 122 IPR006121 GO:0046872
Alju12g0664 998 FunFam Copper-transporting ATPase HMA5 133 204 - -
Alju12g0664 998 Gene3D - 630 926 IPR023214 -
Alju12g0664 998 Gene3D - 52 123 - -
Alju12g0664 998 NCBIfam HAD-IC family P-type ATPase 415 948 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju12g0664 998 SUPERFAMILY HMA, heavy metal-associated domain 53 127 IPR036163 GO:0046872
Alju12g0664 998 SFLD Haloacid Dehalogenase 645 920 - -
Alju12g0664 998 ProSitePatterns Heavy-metal-associated domain. 140 169 IPR017969 GO:0046872
Alju12g0664 998 Gene3D - 430 553 - -
Alju12g0664 998 ProSitePatterns E1-E2 ATPases phosphorylation site. 665 671 IPR018303 -
Alju12g0664 998 FunFam Copper-transporting ATPase HMA5 55 126 - -
Alju12g0664 998 Gene3D - 205 275 - -
Alju12g0664 998 Pfam Heavy-metal-associated domain 138 198 IPR006121 GO:0046872
Alju12g0664 998 Pfam Heavy-metal-associated domain 59 120 IPR006121 GO:0046872
Alju12g0664 998 Pfam Heavy-metal-associated domain 216 269 IPR006121 GO:0046872
Alju12g0664 998 NCBIfam copper ion binding protein 58 121 IPR006122 GO:0005507
Alju12g0664 998 NCBIfam copper ion binding protein 138 199 IPR006122 GO:0005507
Alju12g0664 998 SUPERFAMILY Calcium ATPase, transduction domain A 463 549 IPR008250 -
Alju12g0664 998 CDD HMA 59 122 IPR006121 GO:0046872
Alju12g0664 998 ProSiteProfiles Heavy-metal-associated domain profile. 209 275 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0664 Alju-ChrAlju12 12502020 12516246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0664 51 998 Primary Pumps ATPases AT1G63440 71.368 0.0 1419