Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0652 ATGAGACAAGCCGGAGCATATTCAGGACTACACTGTGGGGGACTAACAGGGAGGATGGGGCCTCACGCGCTACCATTAGCGAGGATAAAGAAGATAATGAAGAAATCTGGGGATGACGTCAAGATGATATCAGGTGAGGCTCCTATTGCTTTTGCCAAAGCTTGCGAGCTCTTCATTGAAGAACTCACACGAAGGTCTTGGCTCATGACCACCCAGTCCAAGCGTCGGACCCTCCTCAAGGACGACGTTGCCTCTGCCGTCATCGCCACCGATCTCTTTGACTTCCTCATCTCTTTGGTCACCCACCACCACCACTACACTGATGATGATGCCTCTCCTTCTCCCTCTACTACCATTATGGAATCTTAA 369 0.5068 MRQAGAYSGLHCGGLTGRMGPHALPLARIKKIMKKSGDDVKMISGEAPIAFAKACELFIEELTRRSWLMTTQSKRRTLLKDDVASAVIATDLFDFLISLVTHHHHYTDDDASPSPSTTIMES 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0652 122 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 22 104 - -
Alju12g0652 122 SUPERFAMILY Histone-fold 16 96 IPR009072 GO:0046982
Alju12g0652 122 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 24 87 IPR003958 -
Alju12g0652 122 FunFam Nuclear transcription factor Y subunit C 12 102 - -
Alju12g0652 122 Gene3D Histone, subunit A 15 102 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0652 Alju-ChrAlju12 12134223 12134591 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0652 22 112 CCAAT-HAP5 Transcription Factor Family AT5G63470 60.440 5.47e-33 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Alju12g0652 CBFD_NFYB_HMF 2.5e-18 CL0012