Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0646 ATGTGCGAAACTTTTTCGGCTGAATCTGGGATAATACAAATGGAAAAGGTTGAGGGTCGATCTTATTGGAGTGAATTCTTCCGAGGGAAACAAGATTTGCCGGGCTTTGAATACTTGCCCGATGATTTGGGATCCAAGGTCAAAGTCTATGAGGCTGCTACTGGCAATGGGAGTTATTCAGAATCTGCAGTCAACGAAGAAGAAGATGATGATCATCTGAGAAATGTTGTTGAAGATGATGGAGAAAGAAATTGGAGATCTGACAACGACGAGCGTGTGCGAGGTGCAAGATTGACTTCAGGATGGCAAGGATTCGTTGAGGATAATGAACTGAAATCAAAAGATATCTGCGTCTTTAAGTTGATGAAAAATGATGAGCATGATATTCGCTTCTGTGTTTGTGCTTATCGATGGGATGATCACATTCATACCTATAGTAGGATGTTTTAG 450 0.4111 MCETFSAESGIIQMEKVEGRSYWSEFFRGKQDLPGFEYLPDDLGSKVKVYEAATGNGSYSESAVNEEEDDDHLRNVVEDDGERNWRSDNDERVRGARLTSGWQGFVEDNELKSKDICVFKLMKNDEHDIRFCVCAYRWDDHIHTYSRMF 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0646 149 CDD B3_DNA 76 137 IPR003340 GO:0003677
Alju12g0646 149 Gene3D - 58 140 IPR015300 -
Alju12g0646 149 Pfam B3 DNA binding domain 76 134 IPR003340 GO:0003677
Alju12g0646 149 ProSiteProfiles B3 DNA-binding domain profile. 76 139 IPR003340 GO:0003677
Alju12g0646 149 SUPERFAMILY DNA-binding pseudobarrel domain 79 137 IPR015300 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Alju12g0646 B3 2.5e-11 CL0405