Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0628 ATGGCTACGTCCAGGTCAATGGACCGTTCCTCTGACGACATCGTCGATTCAACGCCTTTTCTGGGGAATTCAGGTGGTTCTTCCGATGAATTCAATTCCGGCCGTCGATTTGTGCGAAGACAGAGTCTGCGACAAGCTGCACGGTTCCTCAGGCACGCTAGTGGTCGTAGGATGATGCGCGAGCCATCAATGATGGTTAGAGAGACTGCAGCCGAGCAATTGGAAGAGAGACAAAGCGATTGGGCTTATTCCAAACCCGTTGTGATTCTTGATATTATTTGGAATTTTGCCTTTGTTATTGCGGCCGCTACAGTGCTGGTTATGAGCAGAAATGAATCGCCAAGCGTGCCGTTGAGGTTGTGGATTGTGGGTTATGCTATTCAATGCGTCCTTCACATATTCTGTGTCTGCGTTGAGTATAGGAGGCGGAGGCGGAACCAACAGAGTCAATCCCCGTCATCCTTGGACTCAGTGCCAAGGTCTGGAAGCAGTGACAATTCGAGTTCCGGTTCAAGGGAGAATTCTGGGCATTATGAGAGTTTACCGCAATTTCATGAGGAGGGTACGAGCAGTACTGTAAAGCATCTCGAATCAGCCAATACAATGTTCTCATTCGTTTGGTGGATCATTGGATTTTACTGGGTGTCCTCTGGTACTCAAGATTTAGCCAATGATTCTCCTCAGCTTTACTGGCTATGCATTCTTTTCCTGGCTTTTGATGTTTTCTTTGTCATTTTCTGCATTGCACTGGCGTGCATTATTGGCATTGCTGTTTGCTGTTGTCTTCCATGTATCATTGCTCTTCTTTATGCTGTTGCAGACCAGGAAGGGGCCACAAAACAAGACCTTGAGCAGTTGTCGAAATACAAATTCCGTAGAATAGACAATGAGAAAGTTGCTGGTAGCACAGAAGGACCTGTGGGAGGTGTGATGACTGAATGTGGCTTCGATTTACCCACTGAACGTGTTCTTTCCAATGAGGATGCGGAATGTTGTATCTGCCTTTCTGCTTATGAGGATGGGGTTGAACTAAGAGAACTTCCTTGTGGTCACCATTTTCATTGTGCCTGTGTCGACAAGTGGCTGTACATAAACGCAACTTGCCCGCTCTGCAAGTATAATGTTTTGAAGGGTAGCAGCTACGGTCAAGAGGAAATTTAG 1161 0.466 MATSRSMDRSSDDIVDSTPFLGNSGGSSDEFNSGRRFVRRQSLRQAARFLRHASGRRMMREPSMMVRETAAEQLEERQSDWAYSKPVVILDIIWNFAFVIAAATVLVMSRNESPSVPLRLWIVGYAIQCVLHIFCVCVEYRRRRRNQQSQSPSSLDSVPRSGSSDNSSSGSRENSGHYESLPQFHEEGTSSTVKHLESANTMFSFVWWIIGFYWVSSGTQDLANDSPQLYWLCILFLAFDVFFVIFCIALACIIGIAVCCCLPCIIALLYAVADQEGATKQDLEQLSKYKFRRIDNEKVAGSTEGPVGGVMTECGFDLPTERVLSNEDAECCICLSAYEDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNVLKGSSYGQEEI 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0628 386 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 317 379 IPR013083 -
Alju12g0628 386 ProSiteProfiles Zinc finger RING-type profile. 331 372 IPR001841 -
Alju12g0628 386 FunFam E3 ubiquitin-protein ligase At1g12760 317 382 - -
Alju12g0628 386 MobiDBLite consensus disorder prediction 1 32 - -
Alju12g0628 386 MobiDBLite consensus disorder prediction 148 186 - -
Alju12g0628 386 SUPERFAMILY RING/U-box 321 377 - -
Alju12g0628 386 Pfam Ring finger domain 330 372 IPR001841 -
Alju12g0628 386 SMART ring_2 331 371 IPR001841 -
Alju12g0628 386 PANTHER TARGET OF ERK KINASE MPK-1 54 377 - -
Alju12g0628 386 MobiDBLite consensus disorder prediction 16 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0628 Alju-ChrAlju12 10717539 10728626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0628 24 379 C3H Transcription Factor Family AT1G68070 50.281 1.11e-118 346