Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0615 ATGATTCATCCGCAAAACGCACGTCGCTTCGTTTCTAAGAACGGAGCCGTTTCACTGCAAGCTTCCGATGTCGTCAAAATGATCCAAACTCAATCTTCCTCTTCACCTCATTGGTTCGTTCAGACCCATCCAAACACACCCTTAGTTACTGACATTGATCCTCGACCTTTGCTAATTTCTTCATTTCTCGATCGTTTTCCTTCCGGCGGTTACGTTTTCAGAGTTCCGAGCAGCACACTTCTAGATCGTGTTTACTTAGCTGAGGGGAAAATCATGGTAGAGGTTAAAATGGAGCCGGAGGAGTTCTCTTTGGATTCATCTAAAGGAGATGGACTCCAGTTATGTTTTTCAACATCTGTGTCACGGAGAAGAGGACGAGCTAGACGCTCATCAAAGGGGTGCTGGACAGAGGAAGAGGACAGCCGTTTGATTGAGGCAGTCAAGAAGCACAATGGAAGGGATTGGAAGAAATAG 474 0.4599 MIHPQNARRFVSKNGAVSLQASDVVKMIQTQSSSSPHWFVQTHPNTPLVTDIDPRPLLISSFLDRFPSGGYVFRVPSSTLLDRVYLAEGKIMVEVKMEPEEFSLDSSKGDGLQLCFSTSVSRRRGRARRSSKGCWTEEEDSRLIEAVKKHNGRDWKK 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0615 157 CDD SANT 135 157 IPR001005 -
Alju12g0615 157 ProSiteProfiles Myb-like domain profile. 127 157 IPR001005 -
Alju12g0615 157 SUPERFAMILY Homeodomain-like 129 157 IPR009057 -
Alju12g0615 157 Gene3D - 124 157 - -
Alju12g0615 157 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 132 157 IPR017930 -
Alju12g0615 157 Pfam Myb-like DNA-binding domain 132 157 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0615 Alju-ChrAlju12 10422282 10424383 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0615 122 157 MYB Transcription Factor Family AT4G32730 55.556 2.15e-06 44.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju12g0615 Myb_DNA-binding 9e-07 CL0123