Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0612 ATGTTGGCTGGGTGTTCTAGTTCTACATTGTTGTCGCCGAGGCATAGATTGAGGAGTGAAGCATCAGCACAGTTTCAAGCCAGCCATTTCCAGTTGCCTTCCATGAGCACTCAGAGACTGGACTTACCATGTAGTAGCTTCCCGCGCAAAGACAGCACCAACAGCTCGAGATCGCAGTCCTTGAGGCCCGTCGAGAAGAAGCAACCTGTCGTCGTCGAGTCGAAGCCGAAGCAGCCGCCGCCAAAGTGTTCTCTGAAACAGAACATCCGACTTCCTCCATTGGCGACTCAGAGGAACGAGTTCTGGAGTGAGAAAGGTAAGAGCTTGAAGAGACTAGCTGAACAGGATAATGATGAATCCTTCACCAACAGAGCCAAGAGGACAAAGGGTGTTATCAGTGACACCGAAAATCCCGATGTGGGTACCGCCGGCAACTTCTGGTTCAACAATCCTCCCATTCCTTTCTCTCTGACATGTTCAGGGGGAGAAGGAGATGAAGAAAGGGTTTGTTTTGTGCCGTCTGAGGTTGTCTCTGCACCATGGGTGGATTCCATTGTTACGAAGATCACAGATTTAGGCGAGAAAGGAGGCGTTGAGGGAAGCAATCTACCATCAAAGGAAGCTTCAGCATCGAACACTTCATCAGAAAGTCAAAGCTTGAGCCTGAGATTGAACGAGAATGACTCAGAACAAGAAGTAGTCGGTAACGGAAGAAGAGGCAATCCTTATCACCATGACGGAACAGAAGTAGAAACAGGGGATGAAGAAAACCAAGAGGAGCATCGAGGGTTCGAGCTAGTGAGCCTACTTACAGCTTGTGTTGATGCTATTGGTTCAAGAAATGTTGCTGCAGTGAATTGCTTCATAGCAAAACTTGGCGATCTTGCTTCTCCAAGAGCAAGAACATCAATTAGCCGTGTCTGTGCTTATTTCACAGAAGCTTTAGCCATCCGTGTCACAAGAATTTGGCCTCACTTTTTTCACATTACAACACCTCGAGAGCTAGACAGGGTTGAAGATGAAGCTGGAACTGCATTAAGGCTTCTAAACCAGGTCAGCCCAATTCCAAAGTTTCTTCATTTCACGTCTAATGAGATTCTCTTGAGGGCGTTTGAAGGAAAAGACAGGGTTCACATCATAGACTTTGACATTAAGCAAGGTCTTCAATGGCCAAGCTTGTTCCAGAGTCTAGCTTCAAGGACGAATCCACCAAGCCATGTAAGAATCACTGGTATAGGAGAGTCCAAACAAGAACTGAACGAAACAGGGGATAGACTTGCTGGTTTTGCTCAAGCCTTGAACCTTCCCTTCGAGTTCCACCCTGTGGTTGATAGGCTAGAAGATGTGAGGCTATGGATGCTTCATGTGAAGGAACATGAAAGTGTGGCTGTGAATTGCATTTCTCAGCTCCACAAAACACTCTACGATGTTTCTGGAGGAGCATTAAGGGATTTTCTTGGCCTAATCCGAAGCACAAATCCTTGTATAGTTCTCATGGCAGAGCAAGAAGCAGATCACAATGGGGTTAGACTTGAAACCAGAGTATGTAATTCGTTGAAGTATTACTCTGCTCTGTTTGATTTAGTTGACCATTGTCTACCACAAGAAAGTCCAGTAAGGAACAAGATAGAGGAGATGTTTGCTTGGGAGATAAGGAACATAATTGCTTGTGAAGGAAGGGAAAGGGTTGAGAGGCACGAGAGCTTTCAGAAATGGAGGAAGATGATGATGGAGCAAAGAGGGTTTAGAAGCTATGGGATTAGTGACAGAGAAGTGAATCAGAGTCAGATGTTGCTGAAGATGTATGCTTGTGAAAATTATAATGTGAAGAAGAAGACGGAGGAAGAAGCTGAAGCTATCACACTGAGTTGGCTTGAGCAGCCTCTTTACACAGTGTCAGCGTGGGCCCCACTTGATGCAGCAGCAGCAGTAACAGGAAGCCCATCTTCTTATTCTCAGCCATGA 1965 0.4601 MLAGCSSSTLLSPRHRLRSEASAQFQASHFQLPSMSTQRLDLPCSSFPRKDSTNSSRSQSLRPVEKKQPVVVESKPKQPPPKCSLKQNIRLPPLATQRNEFWSEKGKSLKRLAEQDNDESFTNRAKRTKGVISDTENPDVGTAGNFWFNNPPIPFSLTCSGGEGDEERVCFVPSEVVSAPWVDSIVTKITDLGEKGGVEGSNLPSKEASASNTSSESQSLSLRLNENDSEQEVVGNGRRGNPYHHDGTEVETGDEENQEEHRGFELVSLLTACVDAIGSRNVAAVNCFIAKLGDLASPRARTSISRVCAYFTEALAIRVTRIWPHFFHITTPRELDRVEDEAGTALRLLNQVSPIPKFLHFTSNEILLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGIGESKQELNETGDRLAGFAQALNLPFEFHPVVDRLEDVRLWMLHVKEHESVAVNCISQLHKTLYDVSGGALRDFLGLIRSTNPCIVLMAEQEADHNGVRLETRVCNSLKYYSALFDLVDHCLPQESPVRNKIEEMFAWEIRNIIACEGRERVERHESFQKWRKMMMEQRGFRSYGISDREVNQSQMLLKMYACENYNVKKKTEEEAEAITLSWLEQPLYTVSAWAPLDAAAAVTGSPSSYSQP 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0612 654 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 217 631 IPR005202 -
Alju12g0612 654 MobiDBLite consensus disorder prediction 43 63 - -
Alju12g0612 654 MobiDBLite consensus disorder prediction 194 259 - -
Alju12g0612 654 MobiDBLite consensus disorder prediction 204 231 - -
Alju12g0612 654 Pfam GRAS domain family 266 635 IPR005202 -
Alju12g0612 654 ProSiteProfiles GRAS family profile. 257 636 IPR005202 -
Alju12g0612 654 MobiDBLite consensus disorder prediction 43 87 - -
Alju12g0612 654 MobiDBLite consensus disorder prediction 242 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0612 Alju-ChrAlju12 10356392 10358356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0612 1 635 GRAS Transcription Factor Family AT1G63100 59.259 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju12g0612 GRAS 2.8e-124 CL0063