Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0610 ATGGCCGACGAAGAGAAGAGAGAAAATCTTTATCAAGCAGTGTTGGATCGGTGTCAAAGTTTAGAGGCGAAGCAAGCGAAGCTACAAGAGCAGTTCAGTGAGCTGATACAGGAAAGAAATTCGAAGGTGAAAGATATTGAGGAGGACGTCGTCGTAGATTCAAACATGAGCTTGATTTCTGGATTCTTCTCGACTGGTAGTCCGTCCAAAAGTGTGTTGGAATGTATGGGTAACGCTGTTTTTGTATACAACGTGTCGCCTGGAGAGATCATATACTGGAACCATTCAGCGGAAACTCTGTACGGATGGAAGAAGCACGAAATCATTGGTCAAAGAGTTGCTGAGCTCTTAATCACTGAAGAATATCATGCACTTTTACGGAAAATTCTAAAAAGGTTGACCTCTGGTTCGCCATGGTCAGGGCAGTTTCCTTTTAAGGAGAGGGCCGGTGAATTATTTATGGCAATGGTGACAAAATCTCCTCTTTATGAGGATGGTGAACTCATTGGTGTCATCACAGTTTCAAGTGATGCAGCCTTATTTAATTGTATAGGTTCTGAAAATATAAGAACTAACTGCGAGAAATTCGGTGTTAATGGAGCATCTGGAGTACAGAAGTTGAACTTCAAGAGAATACAGTGGCATCCACCGCCACTGGTTGCACCAGTGCCACAGATTGCATCATCTGTTTCCAATTTGGCATCAAAGCTTCTAGGTCGACATACAGATGATACGTCAGCACATGAAGAAGTTGATAATTTAGAGAAGTGCAGTATATATGAAAGAAAATCAAATTCCAGTGATCACCATGGAGAAAGAAGATCAGTAGGGAGGACCTCAGAGAAGGATGAATCAACTGCTGAATTTTCTAGACCTTCCAAAATTGTGGCCAGTGTCTTTGCTAAGCTGCAGATGAGAAGAAGTGAAAAATGTGGGAAAGATAATGCAAGTGTAAAAAATAATTGCTCAATTGATGATTTAGCAGGCAAGGAAATGAAGAATAAAAATGAATTGGCTGGAGGTTCACAGGCACTAAGCTCACACCAGAATGCTCCTAACAGAGAGGAGAAAGGAGAAAACCTCAATAGAACTAATTCTTCTGCTAAAGAGACAGCATACTCGAAAGCTCCTGGATATACAACTTTTCATGTTTCCCAGGATCATTCTGTTGCTGCTTCATTAGGAGAGTGCCATGATTGTCGTGGTTCTTCTGTTCATGAACACCCATTGTTAAGATTTGGCTCTTCTTGTGACCCAAAGAATTTGGAGCCAGAAGCAACAAATTCAGTGACAGAAGATGATGTGCAAAAGCAGCTAGAAAGAGTGCAATTACCAAACTCCAGGGATAGTACAGGGAGCCATGGAAGTTCATCAAGCAAAGGGGATAATGAGTCAAATGTAGCTGTTGAGTGTCAAATCCAATGGGAAGATCTTCAATTAGGAGAGGAGATTGGACAAGGTTCTTATGCTACTGTTCACCGAGGGGTTTGGAATGGATCGGATGTTGCTGTTAAGGTTTACTTTAGCAATGGATACACTAAGGATACATTAAAAGACTACACAAAAGAGATTGATATAATGAAGAGATTGAGACATCCTAATGTTTTGCTGTTCATGGGAGCTGTATATTCACAGGAAAGGGTTGCCATAGTGACAGAGTTTTTACCAAGGGGAAGCCTCTTCAAAACTCTTCACATGAACAACAATCAGACATTAGACCTTAGAAGGCGTCTAAGGATGGCCCTTGATGTTGCCAAAGGCATGAATTACCTTCATCACAGAAATCCACCAATTGTGCATAGAGACTTGAAGTCTTCTAACCTTCTTGTCGATAAAAACTGGACGGTTAAGGTTGGAGACTTTGGCTTGTCAAGGTTGAAAGATGGAACTTTCTTGAATACAGTATCTGGAAGAGGCACTCCTCAGTGGATGGCTCCTGAAGTCCTTCGAAACGAACCTTCAAATGAGAAGTGTGATGTGTTCGGTTTTGGCGTCATCCTTTGGGAGCTAATGACCCAATCTGTTCCATGGAACAATTTGAACTCCTTGCAGGTTGTTGGAGTGGTGGGCTTTATGGATAGAAGACTGGACCTGCCGGAGGGGATTGATCCCCACGTAGCAAATATCATCCGTGACTGCTGGCTGGCACAGTGA 2154 0.422 MADEEKRENLYQAVLDRCQSLEAKQAKLQEQFSELIQERNSKVKDIEEDVVVDSNMSLISGFFSTGSPSKSVLECMGNAVFVYNVSPGEIIYWNHSAETLYGWKKHEIIGQRVAELLITEEYHALLRKILKRLTSGSPWSGQFPFKERAGELFMAMVTKSPLYEDGELIGVITVSSDAALFNCIGSENIRTNCEKFGVNGASGVQKLNFKRIQWHPPPLVAPVPQIASSVSNLASKLLGRHTDDTSAHEEVDNLEKCSIYERKSNSSDHHGERRSVGRTSEKDESTAEFSRPSKIVASVFAKLQMRRSEKCGKDNASVKNNCSIDDLAGKEMKNKNELAGGSQALSSHQNAPNREEKGENLNRTNSSAKETAYSKAPGYTTFHVSQDHSVAASLGECHDCRGSSVHEHPLLRFGSSCDPKNLEPEATNSVTEDDVQKQLERVQLPNSRDSTGSHGSSSSKGDNESNVAVECQIQWEDLQLGEEIGQGSYATVHRGVWNGSDVAVKVYFSNGYTKDTLKDYTKEIDIMKRLRHPNVLLFMGAVYSQERVAIVTEFLPRGSLFKTLHMNNNQTLDLRRRLRMALDVAKGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKDGTFLNTVSGRGTPQWMAPEVLRNEPSNEKCDVFGFGVILWELMTQSVPWNNLNSLQVVGVVGFMDRRLDLPEGIDPHVANIIRDCWLAQ 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0610 717 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 275 714 - -
Alju12g0610 717 MobiDBLite consensus disorder prediction 258 289 - -
Alju12g0610 717 MobiDBLite consensus disorder prediction 339 372 - -
Alju12g0610 717 FunFam PAS domain-containing protein tyrosine kinase family protein 556 717 - -
Alju12g0610 717 SMART serkin_6 478 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0610 717 SUPERFAMILY PYP-like sensor domain (PAS domain) 71 177 IPR035965 -
Alju12g0610 717 ProSiteProfiles PAS repeat profile. 70 137 IPR000014 -
Alju12g0610 717 ProSitePatterns Protein kinases ATP-binding region signature. 484 505 IPR017441 GO:0005524
Alju12g0610 717 Pfam PAS domain 78 177 IPR000014 -
Alju12g0610 717 MobiDBLite consensus disorder prediction 258 290 - -
Alju12g0610 717 MobiDBLite consensus disorder prediction 413 466 - -
Alju12g0610 717 SUPERFAMILY Protein kinase-like (PK-like) 465 715 IPR011009 -
Alju12g0610 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Alju12g0610 717 NCBIfam PAS domain S-box protein 85 177 IPR000014 -
Alju12g0610 717 CDD PAS 76 177 IPR000014 -
Alju12g0610 717 Gene3D PAS domain 78 179 - -
Alju12g0610 717 FunFam Serine/threonine-protein kinase isoform 1 468 556 - -
Alju12g0610 717 Coils Coil 11 38 - -
Alju12g0610 717 Gene3D Phosphorylase Kinase; domain 1 471 555 - -
Alju12g0610 717 MobiDBLite consensus disorder prediction 440 466 - -
Alju12g0610 717 Pfam Protein tyrosine and serine/threonine kinase 478 715 IPR001245 GO:0004672|GO:0006468
Alju12g0610 717 CDD STKc_MAP3K-like 484 714 - -
Alju12g0610 717 ProSiteProfiles Protein kinase domain profile. 478 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0610 717 Gene3D Transferase(Phosphotransferase) domain 1 557 717 - -
Alju12g0610 717 SMART pas_2 67 134 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0610 Alju-ChrAlju12 10266959 10272481 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0610 1 714 MAP Kinase Kinase Kinase AT4G23050 43.426 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Alju12g0610 PK_Tyr_Ser-Thr 1.5e-59 CL0016