Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0609 ATGGGCAGGGCATCCAAATGGTTTCGCTCTGTTTTTGGTCTCAAGAAGTCGTCGGAGTCCTCATCTTCACCGTTGCCGTTGACTCTACCACCTGGCTCAGCTTCAAAGCCAGTCAAAGACAAACGCCGGTGGAGCTTCGTCAAGTCTTACAGGGAATCCGGCGCTGCTAAAACCTCCGACGTCCATCACACAGCGTTCAGAGATGAAGCGGTTCCGTCGTCCGGACACATCGACGGCGTGTGCCCTGACATGCACGCAATGACTGTTGCTGCTGCCAAGGCTGCTGTGGCGGAAGCCGCAGTCGCTGCTGCTCAGGCCGCTGCCGCCGTTGTCAGGCTTACAGGCAGCGTCAGGTGCCCTGAGAGCATTGAGACGCGGGAGGAATGGGCAGCCATCAAGATTCAGGCCGCTTTCCGAGGCTGTTTGGCAAAGAGAGCATTACGGGCACTAAAAGGATTAGTGAAGCTTCAGGCATTGGTGAGAGGTCATATTGATAGGAAGCGAACGGCAGAATGGTTGCATAGAGTACATGCTCTTGTTCGAGTACAGACACGTGTCCGTGCCGGGCGCGCTCAAATTCTGCAGACACCATTTTCAAATTCCAAGTCATCTAAAGCAGATTTCCATGGTCCAGCAACGCCAGACAAATTTGAAAGCCCGATCAGATCCAAGAGCATGAAATTTGATCATTCATCATCACTAAAGAGAAATGTGTCCAAGTCCCATTTTCAGGTACATGGGAATCAAGACAAATGTTGGGACGATGATAAAAGCGACAGGATTCTCGAGATTGATTCTGGGAAACAACACTTCACGCCGAAACGCCGGAACCTCTTTCACACCGTTAACTATCCTTCAGTATGTGATAATCACAGCCAAAGTTTCTGTACTGCAAAGGACTCAGTAAGTCATCAATCAGGTCACAGCATGTCTTCATTCGAAGAAGGCGTCGTGGATGGTCCTCAACTCTTGTCTGTTTTCTCAAAAGACTATGGCCTCAAAACTAGTCCTTTGACTCCGAGCAGAAGCGACGACTCAAGAAGCCATCTGAGTTCTTATTCTGACTACCCAAGTTACATGGCTTACACTGAATCTTCAAAGGCAAAAGTCAGGTCACTGAGTGCTCCAAAGCAAAGGCCTCAACAATATGAGAGGTCTAGTTCATCTAATAGGTACTCAGTTCAAGGATTTGGTGAATCAAGATTGGCCACCCAGAAAGCAAATGCTTTGCATGCAAACTTCACTAGCAAAGCCTATCCAGGTTCTGGTCGTTTGGACAAGTATGGTATGCCTGTGGGATATAAATACTGA 1311 0.4874 MGRASKWFRSVFGLKKSSESSSSPLPLTLPPGSASKPVKDKRRWSFVKSYRESGAAKTSDVHHTAFRDEAVPSSGHIDGVCPDMHAMTVAAAKAAVAEAAVAAAQAAAAVVRLTGSVRCPESIETREEWAAIKIQAAFRGCLAKRALRALKGLVKLQALVRGHIDRKRTAEWLHRVHALVRVQTRVRAGRAQILQTPFSNSKSSKADFHGPATPDKFESPIRSKSMKFDHSSSLKRNVSKSHFQVHGNQDKCWDDDKSDRILEIDSGKQHFTPKRRNLFHTVNYPSVCDNHSQSFCTAKDSVSHQSGHSMSSFEEGVVDGPQLLSVFSKDYGLKTSPLTPSRSDDSRSHLSSYSDYPSYMAYTESSKAKVRSLSAPKQRPQQYERSSSSNRYSVQGFGESRLATQKANALHANFTSKAYPGSGRLDKYGMPVGYKY 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0609 436 ProSiteProfiles IQ motif profile. 127 155 IPR000048 GO:0005515
Alju12g0609 436 MobiDBLite consensus disorder prediction 200 220 - -
Alju12g0609 436 PANTHER IQ-DOMAIN 5-RELATED 1 395 - -
Alju12g0609 436 MobiDBLite consensus disorder prediction 15 40 - -
Alju12g0609 436 MobiDBLite consensus disorder prediction 15 29 - -
Alju12g0609 436 SMART iq_5 149 170 IPR000048 GO:0005515
Alju12g0609 436 SMART iq_5 126 148 IPR000048 GO:0005515
Alju12g0609 436 Gene3D - 127 169 - -
Alju12g0609 436 ProSiteProfiles IQ motif profile. 151 178 IPR000048 GO:0005515
Alju12g0609 436 Pfam Protein of unknown function (DUF4005) 339 395 IPR025064 -
Alju12g0609 436 Pfam IQ calmodulin-binding motif 154 168 IPR000048 GO:0005515
Alju12g0609 436 Pfam IQ calmodulin-binding motif 129 148 IPR000048 GO:0005515
Alju12g0609 436 MobiDBLite consensus disorder prediction 369 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0609 Alju-ChrAlju12 10242057 10246484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0609 1 436 IQD Protein Family AT4G23060 41.650 3.74e-70 228