Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0599 ATGGCTTCATCTTCTTGTTCCAAGAGGCACCCTTTGTACCGTGGAATCCGGTGCCGGGGAGAAAAATGGGTGTCGGAGATCCGGGAGCCCCGTAAGCCATCGCGTATATGGCTCGGGACATTTCCGACGCCGGAGATGGCGGCGGCTGCTTATGATGTGGCCGCGTTGGCTCTAAAGGGCAAGGATGCGGCTCTCAACTTGCCGGAGTTTGCTGGGCGGTATCCGGTGCCACTTTCCACCTCGGCTCCTCATATTCGTAGCGCTGCCACCGCAGCCGCCTCACTAGTGAACGTTGAAGCCATTTCCACCAGTAGTGCTACACACAAACACATTAATGCTTCTTCTTCTTCCTCTTCTTCATTTGTTGATGAATGTTACAGCAACAATGACAGGGCCATCTCAATCTCATCGACCTGGTCTGGTGCAGAAGATCATCAGTTTGTGGACGAGGATGCCATTTTCGGTATGCCTAGTTTGCTCCTAGAAATGGCAGAAGGAATGTTGCTGTCCCCTCCCAGGATCACACCTCCAGCACCCTCAGACAATTTTCCTGCTGATTGTTTACTATATATTCTCCTCCAGGGAGACATTAAATTCGGGTCAGACGGTGTAGGACTTCATTGTGTACTGTAA 633 0.515 MASSSCSKRHPLYRGIRCRGEKWVSEIREPRKPSRIWLGTFPTPEMAAAAYDVAALALKGKDAALNLPEFAGRYPVPLSTSAPHIRSAATAAASLVNVEAISTSSATHKHINASSSSSSSFVDECYSNNDRAISISSTWSGAEDHQFVDEDAIFGMPSLLLEMAEGMLLSPPRITPPAPSDNFPADCLLYILLQGDIKFGSDGVGLHCVL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0599 210 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 5 164 - -
Alju12g0599 210 Gene3D AP2/ERF domain 12 69 IPR036955 GO:0003700|GO:0006355
Alju12g0599 210 ProSiteProfiles AP2/ERF domain profile. 12 68 IPR001471 GO:0003700|GO:0006355
Alju12g0599 210 Pfam AP2 domain 11 60 IPR001471 GO:0003700|GO:0006355
Alju12g0599 210 SUPERFAMILY DNA-binding domain 12 68 IPR016177 GO:0003677
Alju12g0599 210 CDD AP2 11 69 IPR001471 GO:0003700|GO:0006355
Alju12g0599 210 SMART rav1_2 12 74 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0599 Alju-ChrAlju12 9736090 9736886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0599 3 175 AP2-EREBP Transcription Factor Family AT2G36450 48.571 2.88e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju12g0599 AP2 5.8e-09 CL0081