Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0576 ATGATACTCGTCTCCCTTGTTCACCGGAAGCATCTCTACCAATTTGCCGCTGTTCATTCCCAAGCCAAGTTTTTAGCCAACCAAAGGTGCCCACTTGAAGAGAAGAAGAAGAAAAGGCACTTTCTATGTGAGCTGAATATGGAAACGACAATGGTGGCAAGTGTTGCAGCCCGAAGAATTCTTTGGCATATCCTCAAAAATTGCGCTCATTGTTTTTCAACGGTTTCCAGTTCTATCGACCCCTTTCATCCAAAATTATCCCAGCAATCTCAGTACAGGAAAGAGATTTCACTTGCCAGTCTCTTCCAAAGGTACGGGCTCCCACCATCACAGATTCAAGGTTTTCTTGCAAAGAATCGTTTTCTCTTGAATTCGAATTTAAAGGAGTTAGAGAAGTGTCTGACTATTCTATTAGCATTCAGGATTCCACAAAACTCTCTCATTTCTTTGATACGTGATTGTCCTGGGATATTGGAACACCAGTTTCTCAAGAAATGGCAAGCTTGTTTCTCAAAACTGCACGGTTTAACCCCTTCCCCACTTATGATCAGAAATTTTTTGCAATACTCTAGGAGGTATCAGCTAGACCCTGGTGAACTTTCAAAAAGCATTGAGATCTTGAGGGGTTTAGGCTTTTCTCATGTTTCTATAGCTCGGGTTTTTGAGGACTTTCCTACTGTGGCCGTGATGAATAAGGGAGAAATTGTTTCTATAATCGAATTTCTCATGGAAATTGGGGTTCCCAGGGACAAGATTGATCGAGTCATAAGTTTGCATCCTAGAGTTTTGGGACTTGGGATCGAAGACCGGTTAAAGCCGTTGCTCTGTGAATTGATCAATTCAGGATTTTCTGATGATGAGATTATAAAAGAGATAATCAGGGAGCCCAAGATTTTGGGAATGGAACTTGGGGAATTTTCACGATGTTTACAATTGCTCAACTCTTTGAAATGTAGAGAAGCGATCAAAGAGAAGATTTTCCAAGAGGGTATGCTGAGAGCTGGTTTTGAAGTAAAATTGAGAGTGGATTGCTTGTGCAGTCATGGTTTAATTCGTAGAGATGCTTTCAAGGTCTTGTGGAAAGAACCAAGGTTGATTGCATATGACTTAGAGAACATTGAAAAGAAGATTGACTTCTTAGTGCACAGGATGGAATATAGCGTTGATTGTTTACCTGATGTTCCAGAATATTTGGGTGTAAATTTCGAAAAGCAGATTGTTCCTAGACACAGTGTGATGGAGTATTTGAAAGCAAAAGGTGCAATTGACTTTGAGGTGAGATTGAAGGATTTGATTAAGCCAAGTAGACTTAGATTTTACAATCTATATGTCAAGCCCTACCCAGAATGTGAAAAATTGTACGGGAGATTTTCAGGAAATGTTGAAGTTAAGCGCAAGCATCCAACTGGACTTTGGAAAATCTTTAAGCCTCGAAAGTTCCCTGAAACCGATGAAGATGTGAAGAACATGAAGTCCTTTATGGACGGAGTAGTGTAG 1497 0.4028 MILVSLVHRKHLYQFAAVHSQAKFLANQRCPLEEKKKKRHFLCELNMETTMVASVAARRILWHILKNCAHCFSTVSSSIDPFHPKLSQQSQYRKEISLASLFQRYGLPPSQIQGFLAKNRFLLNSNLKELEKCLTILLAFRIPQNSLISLIRDCPGILEHQFLKKWQACFSKLHGLTPSPLMIRNFLQYSRRYQLDPGELSKSIEILRGLGFSHVSIARVFEDFPTVAVMNKGEIVSIIEFLMEIGVPRDKIDRVISLHPRVLGLGIEDRLKPLLCELINSGFSDDEIIKEIIREPKILGMELGEFSRCLQLLNSLKCREAIKEKIFQEGMLRAGFEVKLRVDCLCSHGLIRRDAFKVLWKEPRLIAYDLENIEKKIDFLVHRMEYSVDCLPDVPEYLGVNFEKQIVPRHSVMEYLKAKGAIDFEVRLKDLIKPSRLRFYNLYVKPYPECEKLYGRFSGNVEVKRKHPTGLWKIFKPRKFPETDEDVKNMKSFMDGVV 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0576 498 PANTHER CGI-12 PROTEIN-RELATED 94 447 IPR003690 GO:0003690|GO:0006355
Alju12g0576 498 Gene3D Transcription termination factor 3, mitochondrial 232 457 IPR038538 -
Alju12g0576 498 SMART mt_12 388 422 IPR003690 GO:0003690|GO:0006355
Alju12g0576 498 SMART mt_12 289 319 IPR003690 GO:0003690|GO:0006355
Alju12g0576 498 SMART mt_12 253 284 IPR003690 GO:0003690|GO:0006355
Alju12g0576 498 SMART mt_12 218 248 IPR003690 GO:0003690|GO:0006355
Alju12g0576 498 SMART mt_12 183 213 IPR003690 GO:0003690|GO:0006355
Alju12g0576 498 SMART mt_12 356 387 IPR003690 GO:0003690|GO:0006355
Alju12g0576 498 SMART mt_12 113 143 IPR003690 GO:0003690|GO:0006355
Alju12g0576 498 Pfam mTERF 189 306 IPR003690 GO:0003690|GO:0006355
Alju12g0576 498 Pfam mTERF 340 439 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0576 Alju-ChrAlju12 8824556 8826052 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Alju12g0576 mTERF 1.2e-13 No_clan