Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0569 ATGAAAGGGGTCAGTCAAATTCCCCTCTTTGTTCATCATGTTCTTCTGTTTGCTGCTCTTTTATCAATTTCCTCTCTCAAAGTCTCATCATCACCAGAATCTGAGAAGGAAATTCTGCTTCAATTGAAGGGAAATGTCACTGATGACCCCAATAATAGCTTGAGTTCATGGGTATCAAGTGAAAACCCATGTGAAGATTACATGGGTATTTCTTGTAATTCACAAGGATTTGTAGAAAAAATTGTTCTTTGGAACACTAGCTTAGCTGGAGTTTTGTCCCCAGCATTGTCCAGGTTAAAGTTGTTGAAGGTTTTGACATTGTACGGGAATCATTTTTCTGGTAAAATCCCAGAAGAATATGCTGAGTTTCAATCATTATGGAAGATCAATTTGAGCTCTAATGCCTTATCTGGTCCAATCCCAGACTTCATAGGTAATATAAAGAGCTTACGGTTTCTTGATTTGTCACTAAATGGCTTCTCTGGAGATATACCATCAGCTTTGTTTAAATACTGCTACAAAACCAAGTTCCTTTCTCTTTCTCACAACAATCTTTCAGGTTCAATTCCAACTTCCATAGTGAATTGCTTGGACCTTGAAGGTTTTGATTTTTCCTTCAACAATCTCACTGGGAATATTCCTTCAAGACTTTGTGATATTCCAAGGTTGTCCTATGTATCACTGAGGAACAATGCCTTGTCAGGGACAGAGCAAGATCAGATTTTCTCAGAATGTCACAGTTTGGTATATATAAATCTTGCTAGTAACATGTTCAGTGGTTCTGCTCCATTCAACATCCTTGAAATGAAAAATCTTACTAATTTCAATATATCATATAATGGATTCAGTGGACATATTCCTGAGATGAGTTCATGTAGTGAGAGATTGGAATTTTTGGATGCTTCAGGTAATGATTTGGAAGGGGAGATTCTAATGAGCATAACAAGATGCAAGAAGCTCAAGCTTTTGGCCTTGGAGGTAAATAGGCTTATAGGGACTATCCCATTAGGGATTCAAGAATTGAAGAGTCTGTTAGTTGTTAAACTGGGTGATAACTCCATTGGTGGAACCATTCCTAAGAATTTTGGTAACATTGAACTGCTTGAGATTCTGGATCTACACAATCTAAACCTCACTGGTGAAATTCCAAATGATGTAAGCAATTGCAGGTTTCTTCTTGAGTTGAATGTTTCTGGTAATAACTTAGAGGGAGAGATTCCTCAGACCCTTTACAACATGACAAACTTGGAGATTCTGGACCTGCATCAAAACAAGCTCAATGGAAACATCCCACCAAGCCTAGGAAACTCATCAAGCATTAGATACCTGGATTTGTCACATAACTTTCTTTCCGGTCCAATCCCTTCTTCCCTTGGAAATTTAAAATACTTAACATATTTTAATTTGTCATTCAACAAGCTCTCTGGTGTTATTCCTCCTGTTGCAAACATACAAGGTTTTGGTTCCTCGGCATTTTCCAACAATCCTTTTCTCTGTGGTTCTCCTTTAGATGATAATACCTCTTGCTCAGAAAATGGCACAAATTATTCACCTTCAGCTTCTGGGAAGACCAAAGTGCTTAGTGTTTCTGCAATTGTTGCCATGGTAGCTGCAGCCTTCATTCTTGCTGGGGTTTTTTTGGTGGCCATCTTGAACACTAAGACTCAGAACAGAAACAAAGAAGATCATCAGACAATGATTGTTGAGAGCACACCTCTTGGATCAACAGAATCAAGTGTTGTAATTGGGAAGCTGGTTCTCTTCAACAAAAGCTTACCATCAAAGTATGAAGATTGGGAAGCAGGAACAAAAGCATTGCTTGACAAAGAGTCTCTGATAGGCGCCGGATCAATTGGTACAGTGTACAGAACAAATCTTGAAGGTGGGGTTTCAGTTGCAGTCAAAAAGCTTGAAACTTTGGGAACAATCAGAAGCCAGCACGAGTTTGAACACGAAATAGTTCGACTAAGCAACCTCAAACACCCAAATTTAGTTTCTTTCCAAGGTTACTATTGGTCCCCAACAATGCAAATGATCCTATCAGAGTTCATCCTAAATGGAAATCTCTATGATAATCTACATGGAAACAGTGAACAACTAAATTGGTCCAGAAGGTTACAGATTGCACTGGGAACAGCAAGAGCTCTTGCCTATCTTCACCATGACTGTGAACCTCCAATTCTACATCTCAACCTTAAATCCTCCAACATACTCTTAGACAACAAGTATGAAGCAAAGCTATCAGATTATGGCCTAAACAAGTTACTTCCTATTAACAATTATTATGGTGGCACCAAATTCCACAATTCAGTGGGGTACATTGCACCAGAGTTGGCTACAAGTTTAAGGCAGAACGAGAAATGTGATGTTTATAGCTTCGGGGTGATTCTGTTGGAACTGATCACAGGGAAGAAGCCTGTAGAAAGTAGTGTAGCAGCAGCAGAAAATGGAGGAATGGTAGTGGTGTTGTGTGAGTATGTGAGAGTTTTGTTGGAGAGTGGTTCTGCTTCAGATTGCTTGGATAGAAGGTTGATAGGAGGCTTGGCTGAGAGTGAGTTTATTCAGGTTATGAGGATGGGACTAATTTGTACTTCAGAAGATCCTTCTAGAAGACCAGCCATGGCTGAGATTGTGCAGTTCCTTGAGTCTATTGAAATTGCATCAGAATCACGTTGA 2676 0.3931 MKGVSQIPLFVHHVLLFAALLSISSLKVSSSPESEKEILLQLKGNVTDDPNNSLSSWVSSENPCEDYMGISCNSQGFVEKIVLWNTSLAGVLSPALSRLKLLKVLTLYGNHFSGKIPEEYAEFQSLWKINLSSNALSGPIPDFIGNIKSLRFLDLSLNGFSGDIPSALFKYCYKTKFLSLSHNNLSGSIPTSIVNCLDLEGFDFSFNNLTGNIPSRLCDIPRLSYVSLRNNALSGTEQDQIFSECHSLVYINLASNMFSGSAPFNILEMKNLTNFNISYNGFSGHIPEMSSCSERLEFLDASGNDLEGEILMSITRCKKLKLLALEVNRLIGTIPLGIQELKSLLVVKLGDNSIGGTIPKNFGNIELLEILDLHNLNLTGEIPNDVSNCRFLLELNVSGNNLEGEIPQTLYNMTNLEILDLHQNKLNGNIPPSLGNSSSIRYLDLSHNFLSGPIPSSLGNLKYLTYFNLSFNKLSGVIPPVANIQGFGSSAFSNNPFLCGSPLDDNTSCSENGTNYSPSASGKTKVLSVSAIVAMVAAAFILAGVFLVAILNTKTQNRNKEDHQTMIVESTPLGSTESSVVIGKLVLFNKSLPSKYEDWEAGTKALLDKESLIGAGSIGTVYRTNLEGGVSVAVKKLETLGTIRSQHEFEHEIVRLSNLKHPNLVSFQGYYWSPTMQMILSEFILNGNLYDNLHGNSEQLNWSRRLQIALGTARALAYLHHDCEPPILHLNLKSSNILLDNKYEAKLSDYGLNKLLPINNYYGGTKFHNSVGYIAPELATSLRQNEKCDVYSFGVILLELITGKKPVESSVAAAENGGMVVVLCEYVRVLLESGSASDCLDRRLIGGLAESEFIQVMRMGLICTSEDPSRRPAMAEIVQFLESIEIASESR 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0569 891 Gene3D Ribonuclease Inhibitor 173 239 IPR032675 -
Alju12g0569 891 Gene3D Phosphorylase Kinase; domain 1 588 684 - -
Alju12g0569 891 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g12460 171 512 - -
Alju12g0569 891 Pfam Leucine rich repeat 394 448 IPR001611 GO:0005515
Alju12g0569 891 Pfam Protein tyrosine and serine/threonine kinase 610 881 IPR001245 GO:0004672|GO:0006468
Alju12g0569 891 PANTHER OS05G0588300 PROTEIN 313 407 - -
Alju12g0569 891 Pfam Leucine rich repeat N-terminal domain 33 73 IPR013210 -
Alju12g0569 891 FunFam Putative LRR receptor-like serine/threonine-protein kinase 584 683 - -
Alju12g0569 891 Gene3D Transferase(Phosphotransferase) domain 1 685 891 - -
Alju12g0569 891 SUPERFAMILY L domain-like 33 289 - -
Alju12g0569 891 SUPERFAMILY Protein kinase-like (PK-like) 608 883 IPR011009 -
Alju12g0569 891 Gene3D Ribonuclease Inhibitor 31 172 IPR032675 -
Alju12g0569 891 ProSiteProfiles Protein kinase domain profile. 607 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0569 891 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g12460 32 170 - -
Alju12g0569 891 SUPERFAMILY L domain-like 242 503 - -
Alju12g0569 891 Gene3D Ribonuclease Inhibitor 240 511 IPR032675 -
Alju12g0569 891 FunFam Putative LRR receptor-like serine/threonine-protein kinase 685 888 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0569 Alju-ChrAlju12 8702125 8705042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0569 14 890 Receptor kinase-like Gene Family AT1G62950 60.424 0.0 1025
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Alju12g0569 PK_Tyr_Ser-Thr 7.6e-38 CL0016