Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0565 ATGGATCAAATTACAGCACATCCCCATTCTCTTCCTCCTCCATTTCACACAAGGGATCTTCATCATCCACACCATCAATTTCACTCTCTTCATCACCAAAACACAGAAGATGAGCAAAGCGGAAGCAGCGGCGGCCACAATCTCGCTCAGAAAAGGGATCGCGAAGAGAACAGCAACAGTGACGGCAAAGACATGGCGGCAGGGGCCTCCGGCGAGGGCGAGATGACGAGAAGACCCCGAGGACGGCCCGCCGGCTCTAAGAACAAGCCCAAGCCGCCCATCATCATCACGCGCGACAGCGCCAACGCGCTAAGGACACATGTCATGGAGGTCGCCGACGGCTGTGACATCGTCGAGAGCGTCTCCAACTTCGCCCGCCGGCGGCAGAGAGGGGTTTGCATAATGAGTGGGACCGGCACGGTGACGAATGTTACTTTGAAGCAGCCAGCTTCTCCGGGAGCCGTCGTCACTCTCCACGGAAGGTTCGAGATATTGTCGCTGGCCGGATCATTCTTACCGCCGCCGGCTCCACCGGCAGCTTCGGGATTAACTATATATCTAGCTGGAGGACAAGGGCAAGTGGTCGGAGGAAGCGTGGTTGGGACACTAATAGCTTCAGGTCCGGTGGTGATCATGGCAGCGTCGTTTAGTAACGCCGCGTATGAGAGGCTTCCCTTGGAAGAAGATGATCCCTCCATGCCGATGCATGGTGAAGGTGGCGGTGGTGAAGGCGGAATCGGGTCACCGGGAGGAGGCGGTCAACAGCAAGGAGGGCAGCTTTTTGGGGACGGAAATGCAACGGCTCCACTTTTCCATGGCTTGCCTCCAAATCTTCTGAATTCTATACAGATGCCATCGGAAGCATTCTGGGCTACTGGTCGGCCTCCATACTGA 894 0.5649 MDQITAHPHSLPPPFHTRDLHHPHHQFHSLHHQNTEDEQSGSSGGHNLAQKRDREENSNSDGKDMAAGASGEGEMTRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEVADGCDIVESVSNFARRRQRGVCIMSGTGTVTNVTLKQPASPGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLIASGPVVIMAASFSNAAYERLPLEEDDPSMPMHGEGGGGEGGIGSPGGGGQQQGGQLFGDGNATAPLFHGLPPNLLNSIQMPSEAFWATGRPPY 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0565 297 MobiDBLite consensus disorder prediction 227 266 - -
Alju12g0565 297 CDD DUF296 105 172 IPR005175 -
Alju12g0565 297 MobiDBLite consensus disorder prediction 1 95 - -
Alju12g0565 297 ProSiteProfiles PPC domain profile profile. 101 237 IPR005175 -
Alju12g0565 297 Pfam Plants and Prokaryotes Conserved (PCC) domain 105 218 IPR005175 -
Alju12g0565 297 PIRSF ESCAROLA 16 297 IPR014476 GO:0003680
Alju12g0565 297 Gene3D - 104 232 - -
Alju12g0565 297 SUPERFAMILY AF0104/ALDC/Ptd012-like 101 230 - -
Alju12g0565 297 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 38 292 IPR014476 GO:0003680
Alju12g0565 297 FunFam AT-hook motif nuclear-localized protein 104 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0565 Alju-ChrAlju12 8596310 8597203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0565 1 297 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 57.612 2.42e-90 270