Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0561 ATGGCAGAATCTTCTTTGGTGATTGAATATCACAATAGTACTTCTTTTCCTGAAACGGTGGGCTGTTGTGAATCCTTAGTTATAAAAAGTGAATGGGCTGCAGGCTCCGTTGGTACTAATTTTACACCTCATATCATTACCATTAATTCTGGGGAGGACATCACTATGAAGATAATATCATTTTCCCAGCAGGGGCCGCGAGCTATATGCATTCTTTCTGCGACTGGAGTCATATCAAGTGTCATGCTTCAGCAAGCTGATTCTTTTGGGGGTACACTGACATATGAGGGACAGTTTGAAATTTTGTCATTATCTGGCTCATTCATGCCGAATGAAAGTGCAGGAACACGAAGCAGATCGGGTGGCATGAGCGTTTCTTTAGCGAGTCCAGAGGGACGTGTCATTGGGGGTAGTGTAGCTGGTTTGTTGGTAGCAGCAAGTCCTGTGCAGGTTGTGGTTGGCAGTTTTCTGGCGGGAAACCAGCATGATGTGAAGACAAAGAAACAGAAACATGAGATTGTATCAACAGCAATTGTTCCTTTGTCTACTGCTGATCCAATACCTATCCTCTCATCTCCACCTTCCTTCCCTTCTGATAATTGGTCTGCATTGCCTTCTGATATGAGGAACAACATGACCACTGACATTAATATGCCTCTTTCTGCAGGGTAA 672 0.439 MAESSLVIEYHNSTSFPETVGCCESLVIKSEWAAGSVGTNFTPHIITINSGEDITMKIISFSQQGPRAICILSATGVISSVMLQQADSFGGTLTYEGQFEILSLSGSFMPNESAGTRSRSGGMSVSLASPEGRVIGGSVAGLLVAASPVQVVVGSFLAGNQHDVKTKKQKHEIVSTAIVPLSTADPIPILSSPPSFPSDNWSALPSDMRNNMTTDINMPLSAG 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0561 223 Pfam Plants and Prokaryotes Conserved (PCC) domain 43 156 IPR005175 -
Alju12g0561 223 FunFam AT-hook motif nuclear-localized protein 1-like 43 174 - -
Alju12g0561 223 Gene3D - 43 176 - -
Alju12g0561 223 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 31 177 IPR039605 GO:0003680
Alju12g0561 223 CDD DUF296 42 156 IPR005175 -
Alju12g0561 223 SUPERFAMILY AF0104/ALDC/Ptd012-like 40 158 - -
Alju12g0561 223 ProSiteProfiles PPC domain profile profile. 38 180 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0561 Alju-ChrAlju12 8527858 8530338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0561 31 218 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 68.718 2.92e-83 250