Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0552 ATGGATTCTGTTCATTTCCTCCTCCTGGTTTACGTGCTTCTTCTCTTGCTTGCATTTCATAGCCTGCAACCTGTTCGAGGAAATGCCGAGCTGAGAGCTTTGATGGAATTAAAGTCATCTCTGGATCCAGAGGGCAAGGTTCTTGGTTCTTGGGCCAGTGATGGCGAGCCATGTAGTGGTTTGTTTGAAGGGGTAGCATGCAACGAGCATAGAAAAGTGGCCAACATTTCGTTGCAGGGAAAGGGGCTCTCTGGCTGGCTCTCTCCAGCCGTGGCTGAACTCAAATGTTTGTCTGGTTTATACCTTCACTACAACAATCTCTCTGGGGAGATCCCTAGAGAGATTTCAAATCTCACTGATTTGGTTGATCTCTATCTTGACTTTAATAATCTAACTGGAACTATACCTCCTGAGCTCGGCCACATGCCTAATCTCCAAGTGCTGCAGTTAGGATATAACCAGCTCGTGGGAACTATACCAAAAGAGATGGGCTCCTTGAAGCAGCTTACTGCCTTAGAATTACAATGTAACAAATTAATTGGTACAATTCCTCTCAGCTTGGGTAATTTGGAGAAGCTAAGGATGCTAAATCTGAGCTTTAACAGCTTCAATGGCTCAATCCCTGCAACACTTGCTGATCTTGAAATGTTGCAAGTTCTTGATATTCGAAACAATTCTCTATCAGGAAGGGTTCCTTCTGCTTTGAAGACATTGAGGGATGGATTCCAAGGTGCAAATAACCTGGATTTATGTGGGCATGGGTTTTCTACTTTGAAAGCTTGCAGCAATGATCCAACCTTAAACTCTAGCCAGATTGACACCTCAAATCCAACCAAAGAAGGTGTTCCTGCAAAGGATTTTCCTGAACCCGCGAATGTTCAGTTGCATTGTAACCAGACCCATTGCTCAAAATCAAGAATGTTTCCTCAAGCACTCATTGCAGCAAGTGTTATAACTGCCATAATCACATTCATATGCGTTGGACTTTTTACTTTTATCAAATACCGACGCCAAAGGCAAAGAATTACAAATTCATCAGAATCTTCTGAAGGGAAACTTAGTCCTGATCAGCCTAAAGAACTGTACAAAAGAAGTCCATCGCCGCTCGTTAATCTTAACTACTATAATGGATGGGATCCAAATTCAATGGCTGATGCTCAAAACGAAAACAGATTATCCCATGAGTATCTAAACCGTTATAGGTTTACTGTGGATGAGATTGAATCTGCCACACAGTACTTCTCTGAGGCTAACTTATCAAGTAAGAGCAAATTATCAGCAGTCTACAGAGGAATCCTCAGGGATGGCTCACTTGTGGCTATAAGAAGCATTAATGTGACGTGTTGTAAGACTGAGGAAGCTGAATTTGTAAATGGGTTGAACTTAGTGCTTTCATTGAGACATGAAAACCTCGTTAGGCTCAGAGGTTTCTGTTGCTCAGCAAGTAGAGGTGAATGTTTCCTTGTCTATGACTTTGCTCCTAAGGGTGATTTGTCTCAATACCTTGACTTGGAAGATGCAAGTGGTCAAGTTCTAGAGTGGTCCAAGAGGGTTTCTATCATTAAGGGAATTGCAAAGGGTATTGGATATCTACACAGCAATGAAACAAACAAGCCTACAATGGTACACCAAAATATTTCCGTTGAAAAAGTTGTGCTTGATCATCAATTCAACCCCCTGATCATGGATTCTGGTCTCCCAAAGCTTCTCGCAGACGACGCGGTTTTCTCAGCTCTGAAAGTAAGTGCAGCCATGGGATACTTAGCTCCTGAATACATCACTACTGGGAGATTCACTGAGAAAAGTGACATATATGCATTTGGGGTTATAATCCTTCAAGTAGTTTCTGGGAAGACTGTTATAGGTAGTTCAATCAAGATGGCAGTTGAGTCTTTCAGATTTGAAGACATTGTTGATTCAAATCTGAAGGGACGATATGCGAAATCTGAAGCAGCAATGATGGCGAAGCTCGCTGTGATGTGTACTCATGAGCTTCCTGATCAGAGGCCAACTATGGTGGAAGTGATTCAGGAGATGCATGCTTTTCCAGCTCAACATGCTTCTTGA 2067 0.4238 MDSVHFLLLVYVLLLLLAFHSLQPVRGNAELRALMELKSSLDPEGKVLGSWASDGEPCSGLFEGVACNEHRKVANISLQGKGLSGWLSPAVAELKCLSGLYLHYNNLSGEIPREISNLTDLVDLYLDFNNLTGTIPPELGHMPNLQVLQLGYNQLVGTIPKEMGSLKQLTALELQCNKLIGTIPLSLGNLEKLRMLNLSFNSFNGSIPATLADLEMLQVLDIRNNSLSGRVPSALKTLRDGFQGANNLDLCGHGFSTLKACSNDPTLNSSQIDTSNPTKEGVPAKDFPEPANVQLHCNQTHCSKSRMFPQALIAASVITAIITFICVGLFTFIKYRRQRQRITNSSESSEGKLSPDQPKELYKRSPSPLVNLNYYNGWDPNSMADAQNENRLSHEYLNRYRFTVDEIESATQYFSEANLSSKSKLSAVYRGILRDGSLVAIRSINVTCCKTEEAEFVNGLNLVLSLRHENLVRLRGFCCSASRGECFLVYDFAPKGDLSQYLDLEDASGQVLEWSKRVSIIKGIAKGIGYLHSNETNKPTMVHQNISVEKVVLDHQFNPLIMDSGLPKLLADDAVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIILQVVSGKTVIGSSIKMAVESFRFEDIVDSNLKGRYAKSEAAMMAKLAVMCTHELPDQRPTMVEVIQEMHAFPAQHAS 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0552 688 ProSiteProfiles Protein kinase domain profile. 414 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0552 688 Gene3D Phosphorylase Kinase; domain 1 379 492 - -
Alju12g0552 688 SMART LRR_typ_2 118 141 IPR003591 -
Alju12g0552 688 SMART LRR_typ_2 142 166 IPR003591 -
Alju12g0552 688 SMART LRR_typ_2 190 213 IPR003591 -
Alju12g0552 688 SMART LRR_typ_2 214 244 IPR003591 -
Alju12g0552 688 SMART LRR_typ_2 94 117 IPR003591 -
Alju12g0552 688 FunFam Protein NSP-INTERACTING KINASE 2 385 492 - -
Alju12g0552 688 Gene3D Transferase(Phosphotransferase) domain 1 493 685 - -
Alju12g0552 688 Gene3D Ribonuclease Inhibitor 29 142 IPR032675 -
Alju12g0552 688 MobiDBLite consensus disorder prediction 341 365 - -
Alju12g0552 688 SUPERFAMILY Protein kinase-like (PK-like) 389 679 IPR011009 -
Alju12g0552 688 Pfam Protein tyrosine and serine/threonine kinase 426 678 IPR001245 GO:0004672|GO:0006468
Alju12g0552 688 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Alju12g0552 688 Pfam Leucine rich repeat 168 227 IPR001611 GO:0005515
Alju12g0552 688 PANTHER LEUCINE RICH REPEAT KINASE 2 67 161 - -
Alju12g0552 688 FunFam Protein NSP-INTERACTING KINASE 2 27 176 - -
Alju12g0552 688 SUPERFAMILY L domain-like 31 238 - -
Alju12g0552 688 FunFam Protein NSP-INTERACTING KINASE 2 493 683 - -
Alju12g0552 688 Gene3D Ribonuclease Inhibitor 144 272 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0552 Alju-ChrAlju12 8278256 8282451 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0552 9 527 Miscellaneous Gene Families AT4G22730 56.157 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Alju12g0552 PK_Tyr_Ser-Thr 3e-32 CL0016