Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0538 ATGATTCACGTTAAGGCCCTCCTCATGGATATGGTGGTGGGTGGAAGTGACACATCCTCTAACTCAATAGAGTTTGCGATGGCTCATATCCTAAACAATCAAGAGGTGACGAAGAGTGTCCAAGAAGAATTAGACAGTGTAGTGGGAAGAGACAATGTGGTAGAAGAGTCTCATATTAACAAATTACCATATTTGCTTGCCGTTATGAAAGAAACTCTGAGGTTGCACCCTGCTCTTCCACTACTAGTCCCTCACTCTCCAAGTGAAACCACCACTGTGGGAGGCTACACAATCCCAAAAGGCTCTCGTGTGTTCGTGAACGTGTGGGCAATACATAGAGACCCTTCTGTTTGGGACAATCCTCTTGAGTTTGATCCTTCAAGGTTTTTGGATGCTAATAAATGGGATTATAGTGGGAATGACTTCAATTACTTCCCATTTGGGTCTGGACGAAGAATGTGTGCAGGAATTGCCATGGCTGAAAGGACCTTTTTGTATTTTCTTGCAACGTTGATGCATTCATTTGATTGGAAATTACCTGAAGGCCAGAAGTTGGATATTTCTGAGAAGTTTGGAATTGTACTTAAGAAGAAAACACCTTTGGTTGCTATTCCCTCCCCACGACTACTTGACCTTGCTCTTTATGATGAGTAG 654 0.4281 MIHVKALLMDMVVGGSDTSSNSIEFAMAHILNNQEVTKSVQEELDSVVGRDNVVEESHINKLPYLLAVMKETLRLHPALPLLVPHSPSETTTVGGYTIPKGSRVFVNVWAIHRDPSVWDNPLEFDPSRFLDANKWDYSGNDFNYFPFGSGRRMCAGIAMAERTFLYFLATLMHSFDWKLPEGQKLDISEKFGIVLKKKTPLVAIPSPRLLDLALYDE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0538 217 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 147 156 IPR017972 GO:0005506|GO:0016705
Alju12g0538 217 Pfam Cytochrome P450 3 200 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju12g0538 217 PANTHER OS08G0547900 PROTEIN 1 215 - -
Alju12g0538 217 FunFam Predicted protein 12 203 - -
Alju12g0538 217 Gene3D Cytochrome P450 2 204 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju12g0538 217 PRINTS E-class P450 group I signature 23 49 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju12g0538 217 PRINTS E-class P450 group I signature 66 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju12g0538 217 PRINTS E-class P450 group I signature 144 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju12g0538 217 PRINTS E-class P450 group I signature 154 177 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju12g0538 217 PRINTS E-class P450 group I signature 3 20 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju12g0538 217 PRINTS E-class P450 group I signature 107 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju12g0538 217 PRINTS P450 superfamily signature 67 78 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju12g0538 217 PRINTS P450 superfamily signature 14 31 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju12g0538 217 PRINTS P450 superfamily signature 145 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju12g0538 217 PRINTS P450 superfamily signature 154 165 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju12g0538 217 SUPERFAMILY Cytochrome P450 3 208 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0538 Alju-ChrAlju12 7533403 7535288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0538 3 215 Cytochrome P450 AT4G12300 69.484 3.86e-112 328