Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0524 ATGAATACATTTTCACATGTTCCTCCGGGGTTTCGATTCCATCCCACAGACGAAGAACTTGTTGATTACTACCTTAGAAAGAAGGTAGCTTCCAAGAGGATTGATCTTGATGTCATCAAAGACGTTGATCTCTACAAAATAGAGCCATGGGATCTTCAAGAACTGTGCAGAATAGGGAGCGAGGAACAAAATGAGTGGTACTTCTTCAGCCATAAGGATAAGAAGTATCCAACAGGAACTCGGACGAATAGAGCGACAAAAGCAGGATTCTGGAAGGCAACAGGGAGAGATAAAGCGATATATTCGAGGCATATTCTGATTGGTATGAGGAAGACTCTTGTGTTCTACAAAGGAAGAGCTCCCAATGGCCAGAAATCTGACTGGATCATGCATGAGTATCGCCTTGAAACTAATGAAAATGCTACTCCTCAGGAAGAAGGGTGGGTTGTGTGCAGGGTGTTCAAGAAGAGAATGACAACAATGAGAAAAGTTGGAGAATATGAGTCACCATGTTGGTACGACGAAGCTGCCTCCTTCATGCAAGACCTTGATCCATCTCCGAGGCGTAATCATATTTCGCCACCTTACTATGCATGCAAGCAAGAGTTTGAATTCAATTACAACAACTTGAACAATCTCCCTCACGATGCTTTCCTCCAACTTCCTCACCTCGAAAGCCCTAATAAACTCCCCTCATCCATCTTCACTAGTAGCAACACCTTCGATCACAACAGAAACACCACCACAACGACGTCGTTTTTTGATCAACCAGTTGTTGTGGATGATGATCAAGTGGTGGTTACTGATTGGAGGGTGTTTGATAAATTTGTTGCTTCTCAGCTGAGTCAAGATCATCATCACCAACAACATGCTTCATCCAAGGAAACCAATGCTGCTGACGTTGTTGCTGCTAATGTCACTGATCAACAAGTTACTATGATGGAAAATCAGTCGTCGGAGTTGGAGGAGCAGGAATATGCATCGGCCTCCACCACCACCACCTGCAACATTGAACTATGGAAGTGA 1026 0.4386 MNTFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCRIGSEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHILIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENATPQEEGWVVCRVFKKRMTTMRKVGEYESPCWYDEAASFMQDLDPSPRRNHISPPYYACKQEFEFNYNNLNNLPHDAFLQLPHLESPNKLPSSIFTSSNTFDHNRNTTTTTSFFDQPVVVDDDQVVVTDWRVFDKFVASQLSQDHHHQQHASSKETNAADVVAANVTDQQVTMMENQSSELEEQEYASASTTTTCNIELWK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0524 341 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Alju12g0524 341 Coils Coil 304 324 - -
Alju12g0524 341 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Alju12g0524 341 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Alju12g0524 341 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 304 - -
Alju12g0524 341 FunFam NAC domain-containing protein 16 160 - -
Alju12g0524 341 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0524 Alju-ChrAlju12 7106067 7107862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0524 1 339 NAC Transcription Factor Family AT1G62700 54.637 1.38e-134 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju12g0524 NAM 3.5e-38 No_clan