Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0522 ATGTCATCCTCTTCTACTACTACAACTGCTGCCTCTACCTTATCTCAGCTGGACCACTTGCCTCCTTCCTCCGACCAACTTTGTTATGTCCACTGCAACCTTTGTGACACTGTCCTCGCTGTGAGTGTTCCTTGCACGAGCTTGTTCAAGACAGTGACTGTGCGATGCGGCCATTGCACCAACCTTCTTCCTGTGGTTGTCAACATGAGAAGCTTGCTTCTTCCATCTCCAAATCATCATCCATTTCACCTCTCTAACTCTTTCTTCTCTCCCCCTCCTCCCCCTCCTCCCCCTCCCTCTCTTAACCTCCTGGATCAGGAGATGCCAAACTCATCAAATCACTACTTCTCTGTGCCTCCCACTAATCCTAGGGTTGCAGCAGCTAAGGAGCTTCCACGCCCACCTCTCATCAATAGACCCCCTGAGAAGAGGCAGAGAGTCCCATCTGCTTATAATCGCTTCATCAAGGACGAGATCCAACGCATCAAGTCTGCAAATCCTGATATATCCCACAGAGAAGCCTTTAGCGCAGCTGCCAAGAATTGGGCCCACTTCCCTCACATACACTATGGTCTCATGCCTGGTCAGTCTGTGAAGAAGACAAATGTGTGTCAGCAGGAAGGAAACGACGACGTTCGCATCATCAAAGATAATGGCCTTTTCTCTTCTGCTAATCTTGGTGTTTCTCCTTATTAA 696 0.4899 MSSSSTTTTAASTLSQLDHLPPSSDQLCYVHCNLCDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVVVNMRSLLLPSPNHHPFHLSNSFFSPPPPPPPPPSLNLLDQEMPNSSNHYFSVPPTNPRVAAAKELPRPPLINRPPEKRQRVPSAYNRFIKDEIQRIKSANPDISHREAFSAAAKNWAHFPHIHYGLMPGQSVKKTNVCQQEGNDDVRIIKDNGLFSSANLGVSPY 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0522 231 SUPERFAMILY HMG-box 136 185 IPR036910 -
Alju12g0522 231 CDD HMG-box_SF 146 182 - -
Alju12g0522 231 Pfam YABBY protein 23 192 IPR006780 GO:0007275
Alju12g0522 231 FunFam Axial regulator YABBY 137 208 - -
Alju12g0522 231 Gene3D High mobility group box domain 136 187 IPR036910 -
Alju12g0522 231 PANTHER PROTEIN YABBY 6-RELATED 1 202 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0522 Alju-ChrAlju12 7051953 7055083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0522 34 229 C2C2-YABBY Transcription Factor Family AT4G00180 56.481 2.13e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Alju12g0522 YABBY 8e-68 CL0114