Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0482 ATGGAACTATTTTTGGTTCAATCGGAGGCTAACGCCATGGACGAAGTCCACGAAGGACCACCAAATAGAGAACTCTATGCACTCTTAAACTTGTCGCCTGAGGCCTCCGATGAAGAAATCCGAAGAGCTTATCGTCAATGGGCACAAGCCTATCACCCTGATAAATACCAAGCTCCTCATATGAAAGACATTGCTACTGCAAACTTTCAACGTATTTGTGAAGCGTATGAAGTGTTGTCAGATCCAAATAAAAGGCAAATATATGACATATATGGCATGGAAGGTTTGACCTCTGGTCTGGAACTTGGTGCTAAGCTGGATAAAGCAGAAGAGATAAAGGCTGAATTGGAGAGGCTACGACGAATGAAGGAGATGCAAAAGATATCAGCACACTTTAGAACTTCTGGTACAATTCTGGCCAATATGTCTTTGCCACACTGTCGAAATGGTGATGGCCTCATGAGAGGAATGTCTATGACCAGCGAAGTTCAGTCTCAGTTATCAAAACGTAATAGTGTTGCAATTAGTGGCAATTTAGCAGTTAATGGCAATGCAGGTGGTGGGGTTGCTACTGCCTTGTTAAGGCATGAAATTTCAGAAGTTTCTTCTATAGAGTTTATGGCTTCAGCTGGGCTGCGAGCTCTGATAGGGGTGCAAACAACACGTCAACTATCAGCACATTCAGCTGCCACAATGGGCCTTGCCATGTCTTTGCAAGATGGTTCGTTGAACCTTTCTAATTCATGGAACCGCCAACTGTCAGAAACAGCAAGTGGGCATATACAACTTGCTTTGGGGCCACAATCATCTATAGCTGTAGGGTGGCAAAAGAAAGATGAGAGAAGATCTGCCTCCGGAGAAGTGAAGTTTGGCACAAGTTCTTTTGATGTAGCAGCTCATTATACCCATCACTTGTCTTCTAAATCTCATGGTCGCATAGCAGGAAGAATTGGGAGTTCAACCCTTGAGATTGAAATTGGGGGTGGGAGGAAGGTATCCAAATTCAGCACTGTCCGCTGGTTGTATACAATTGGAATTCAGGGAATTATTTGGAAATTTGAACTGCATCGTGGTGGCCAGAAGTTAATTATCCCTATTTTGCTGACCAGACATTTGGATCCTGTCTTTGCTAGTGGGGCACTGATTATTCCAGCATCTCTTTACTTCCTTTTGAAGAAATTTTTAATCAAACCCTATTACCTTAAAAGGAATAAGCAGAAGGCTCTAGAGAATGCAAAGAAAACTTCTGCGCAGGTTCAAGAAGCAAGGGCCACAGCAGAAAAAGCTCAGCAATTACAACAGACCGTGGCTAATAGGAAAAAAAATAAGCAATTAGAAACAGGCGGACTAGTTATTACCAGAGCACTATATGGAAATCACGTTATTTTAAACAAAATAAATTCATCAAGTGCATCAAGTAGTGAATCAGCTTCAGAAGTCATAGATGTTACAATACCTCTCAATTTCCTTGTTAGTGATTCTGGTCAACTCAAGCTTCATGAAGGTGTAAAAAAATCAGGCATCATGGGCTTTTGCGATCCATGTCCTGGAGAACCTAAAAAGTTGTATGTAGAGTACTCTTACACTGGCAACCAATACAAGGTCCTAGTTGATGATTATGAAGCATTATCGATACCCCGGGGCGTCCCCAGGATTTAA 1659 0.4213 MELFLVQSEANAMDEVHEGPPNRELYALLNLSPEASDEEIRRAYRQWAQAYHPDKYQAPHMKDIATANFQRICEAYEVLSDPNKRQIYDIYGMEGLTSGLELGAKLDKAEEIKAELERLRRMKEMQKISAHFRTSGTILANMSLPHCRNGDGLMRGMSMTSEVQSQLSKRNSVAISGNLAVNGNAGGGVATALLRHEISEVSSIEFMASAGLRALIGVQTTRQLSAHSAATMGLAMSLQDGSLNLSNSWNRQLSETASGHIQLALGPQSSIAVGWQKKDERRSASGEVKFGTSSFDVAAHYTHHLSSKSHGRIAGRIGSSTLEIEIGGGRKVSKFSTVRWLYTIGIQGIIWKFELHRGGQKLIIPILLTRHLDPVFASGALIIPASLYFLLKKFLIKPYYLKRNKQKALENAKKTSAQVQEARATAEKAQQLQQTVANRKKNKQLETGGLVITRALYGNHVILNKINSSSASSSESASEVIDVTIPLNFLVSDSGQLKLHEGVKKSGIMGFCDPCPGEPKKLYVEYSYTGNQYKVLVDDYEALSIPRGVPRI 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0482 552 Gene3D DnaJ domain 17 114 IPR036869 -
Alju12g0482 552 ProSiteProfiles dnaJ domain profile. 24 92 IPR001623 -
Alju12g0482 552 Pfam DnaJ-like protein C11, C-terminal 398 546 IPR024586 -
Alju12g0482 552 Coils Coil 102 129 - -
Alju12g0482 552 ProSitePatterns Nt-dnaJ domain signature. 69 88 IPR018253 -
Alju12g0482 552 Pfam DnaJ domain 25 89 IPR001623 -
Alju12g0482 552 Coils Coil 402 432 - -
Alju12g0482 552 PANTHER CHAPERONE PROTEIN DNAJ 13 13 548 IPR042162 -
Alju12g0482 552 CDD DnaJ 24 81 IPR001623 -
Alju12g0482 552 PRINTS DnaJ domain signature 44 59 IPR001623 -
Alju12g0482 552 PRINTS DnaJ domain signature 84 103 IPR001623 -
Alju12g0482 552 PRINTS DnaJ domain signature 26 44 IPR001623 -
Alju12g0482 552 PRINTS DnaJ domain signature 64 84 IPR001623 -
Alju12g0482 552 SMART dnaj_3 23 84 IPR001623 -
Alju12g0482 552 SUPERFAMILY Chaperone J-domain 21 95 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0482 Alju-ChrAlju12 6166596 6177382 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0482 26 89 C2H2 Transcription Factor Family AT1G74250 48.485 5.55e-09 57.0