Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0472 ATGGAAACAGAACCACAAGAACCAGAAGCTCTCCTTCACACTCAACTACAATTAACCACTGCCTCTTCTTCTTCTTCTTCCTCTGGCACCACAGAAGCCATTAATGGACACCATGAAGCTCAAAACAAAGAAGAGAGGGTGAAGAGGAAGAAGACGATGAAGAAGAACACAGACATGGTGGAGGGGAAGCACCCAATGTACAGAGGCGTACGTATGCGTCAATGGGGGAAATGGGTTTCAGAAATCAGAGAACCTAGAAAGAAATCCAGAATATGGCTCGGCACTTTTCCCACAGCGGAAATGGCCGCTCGAGCTCACGACGTCGCCGCTCGAGCCATTAAAGGCGCCTCTGCTTTTCTCAACTTCCCGGAGCTAGCCACCGTACTTCCTCGTCCGGCCAGTAACTCCCCAAAGGACGTCCAAGCCGCCGCCGCCCAAGCAGCCGCCATCAATTACCACATCAACCGTCAAGGACGACCCGAACCCGACTCCGAGGTCATGCCAGCCGACGCTCCGGCATTGTCAAGTTCGACGTCAACGGACGATGATGACACCTTCTTCAACCTTCCCGATATCTTGAATCACGTCGGTACCGGCGAGTTTCATTACTCCTCGCTGTGGCTTACAGCGGGCGTCGATTACAGAGACTCTGGTTTCCGGCTCGAAGAGCCATTTCTATGGTACTCTTATTAA 693 0.5224 METEPQEPEALLHTQLQLTTASSSSSSSGTTEAINGHHEAQNKEERVKRKKTMKKNTDMVEGKHPMYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAARAIKGASAFLNFPELATVLPRPASNSPKDVQAAAAQAAAINYHINRQGRPEPDSEVMPADAPALSSSTSTDDDDTFFNLPDILNHVGTGEFHYSSLWLTAGVDYRDSGFRLEEPFLWYSY 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0472 230 ProSiteProfiles AP2/ERF domain profile. 66 123 IPR001471 GO:0003700|GO:0006355
Alju12g0472 230 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Alju12g0472 230 PRINTS Ethylene responsive element binding protein signature 89 105 IPR001471 GO:0003700|GO:0006355
Alju12g0472 230 MobiDBLite consensus disorder prediction 37 60 - -
Alju12g0472 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 41 194 - -
Alju12g0472 230 MobiDBLite consensus disorder prediction 10 36 - -
Alju12g0472 230 MobiDBLite consensus disorder prediction 157 181 - -
Alju12g0472 230 SMART rav1_2 66 129 IPR001471 GO:0003700|GO:0006355
Alju12g0472 230 SUPERFAMILY DNA-binding domain 66 124 IPR016177 GO:0003677
Alju12g0472 230 Gene3D AP2/ERF domain 66 124 IPR036955 GO:0003700|GO:0006355
Alju12g0472 230 MobiDBLite consensus disorder prediction 1 60 - -
Alju12g0472 230 FunFam Ethylene-responsive transcription factor 2 65 124 - -
Alju12g0472 230 Pfam AP2 domain 66 115 IPR001471 GO:0003700|GO:0006355
Alju12g0472 230 CDD AP2 67 125 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0472 Alju-ChrAlju12 5992562 5993254 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0472 48 226 AP2-EREBP Transcription Factor Family AT2G44940 48.372 1.42e-55 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju12g0472 AP2 3.3e-13 CL0081