Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0463 ATGGAAACAGAACAACAAGAACCAGAAGCTCTCCTTCACACTCAACTTCAATTAACCATGGCCTCTTCTTCTTCTTCTTCCTCCTCCGGCACCACAGAAGCCATTGATGTACACCATGAAGCTCATAACAAAGAAGAGAGTGTGAAGAGGAAGAAGACGATGAAGAAGAACACAAACATGGTGGACGGGAAGCACCCAACGTACAGAGGCGTACGTATGCGTCAATGGGGGAAATGGGTTTCAGAAATCAGGGAACCCAGAAAGCAATCCAGAATAAGGCTCAACACTTTTCCCACGACGGAAATGGCCCCTCGAGCTCACGACGTTGCTGCTCTCACCATTAAAGACGCCTCTGCTTTCCTCAACTTCCCAAAGCTAGCCGCCGTGCTTCCTCATCTGGTCAGTAACTCCCCAAAGGACGTCCAAGCCGCCGCCGCCAATTACCACATCAACCGTCAAAGACGACCCGAACCTGGGTCCGAGGTCTTGCCAACGGACACTCCAACATTTTCAAGTTTGACGTCAACGGACGATGATGACACCTTCTTCAACCTCCCCGATATCTTAAATCACAGCGGCGCCGGTGAGTTTCATTACTCCTCGCTGCGGCTTACAGCGGGCGCCGATTACAAATACTTCGGTTTCCGGCTCGAAGAGCCATTTCTATGGGACTCTTGTTAA 681 0.5051 METEQQEPEALLHTQLQLTMASSSSSSSSGTTEAIDVHHEAHNKEESVKRKKTMKKNTNMVDGKHPTYRGVRMRQWGKWVSEIREPRKQSRIRLNTFPTTEMAPRAHDVAALTIKDASAFLNFPKLAAVLPHLVSNSPKDVQAAAANYHINRQRRPEPGSEVLPTDTPTFSSLTSTDDDDTFFNLPDILNHSGAGEFHYSSLRLTAGADYKYFGFRLEEPFLWDSC 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0463 226 Gene3D AP2/ERF domain 67 125 IPR036955 GO:0003700|GO:0006355
Alju12g0463 226 CDD AP2 68 124 IPR001471 GO:0003700|GO:0006355
Alju12g0463 226 SMART rav1_2 67 130 IPR001471 GO:0003700|GO:0006355
Alju12g0463 226 MobiDBLite consensus disorder prediction 151 171 - -
Alju12g0463 226 MobiDBLite consensus disorder prediction 35 59 - -
Alju12g0463 226 PRINTS Ethylene responsive element binding protein signature 106 126 IPR001471 GO:0003700|GO:0006355
Alju12g0463 226 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
Alju12g0463 226 MobiDBLite consensus disorder prediction 18 34 - -
Alju12g0463 226 MobiDBLite consensus disorder prediction 18 66 - -
Alju12g0463 226 SUPERFAMILY DNA-binding domain 67 124 IPR016177 GO:0003677
Alju12g0463 226 ProSiteProfiles AP2/ERF domain profile. 67 124 IPR001471 GO:0003700|GO:0006355
Alju12g0463 226 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 43 192 - -
Alju12g0463 226 Pfam AP2 domain 66 114 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0463 Alju-ChrAlju12 5806554 5807234 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0463 55 222 AP2-EREBP Transcription Factor Family AT2G44940 44.976 1.28e-46 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju12g0463 AP2 4.6e-10 CL0081