Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0459 ATGGAAACAGAACAACAAGAACCAGAAGCTCTCCTTCACACTCAACTTCAATTAACCACTGCCTCTTCTTCTTCTTCTTCCTCCTCCGGCACCACAAAAGCCATTGATGTACACCATGAAGCTCATAACAAAGAAGAGAGTGTGAAGAGGAAGAAGACGATGAAGAAGAACACAGACGTGGTGGATAGGAAGCACCCAACGTACAGAGGCGTACGTTTGCGTCAATGGGGGAAATGGGTTTCAGAAATCAGCGAACCCATAAAGAAATCCAGAATAAGGCTCGACACTTTTCCCACGGTGGAAATGGACGCTCGAGCTCACGACGTCGCCGCTCTCACCATTAAAGGCACCTCTGCTTTCCTCAACTTCCCAGAGCTAGCCGCCGTGCTTTCTCATTCGGTCAATAACTCCCCAAAGGACGTCGAAGCCGTCACTGCCAATTACCACATCAATCGTCAAGGACGACCCGAACCTGGGTCCGAGGTCTTGCCAGCCGACGCTCCGACATTTTCAAGTTCGACGTCAACGGACGATGATGACATCTTCTTCAACCTCCCCGATATCTTAAATCACAGTAGCGCCGGTGAGTTTCATTACTCCTCGCTATGGCTTACAGCGGGCGCCTATTACAAAGACTTTGGTTTCCAGCTCGAAGAGCCATTTCTATGA 669 0.4948 METEQQEPEALLHTQLQLTTASSSSSSSSGTTKAIDVHHEAHNKEESVKRKKTMKKNTDVVDRKHPTYRGVRLRQWGKWVSEISEPIKKSRIRLDTFPTVEMDARAHDVAALTIKGTSAFLNFPELAAVLSHSVNNSPKDVEAVTANYHINRQGRPEPGSEVLPADAPTFSSSTSTDDDDIFFNLPDILNHSSAGEFHYSSLWLTAGAYYKDFGFQLEEPFL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0459 222 Pfam AP2 domain 66 116 IPR001471 GO:0003700|GO:0006355
Alju12g0459 222 SMART rav1_2 67 130 IPR001471 GO:0003700|GO:0006355
Alju12g0459 222 ProSiteProfiles AP2/ERF domain profile. 67 124 IPR001471 GO:0003700|GO:0006355
Alju12g0459 222 CDD AP2 68 126 IPR001471 GO:0003700|GO:0006355
Alju12g0459 222 MobiDBLite consensus disorder prediction 17 59 - -
Alju12g0459 222 PRINTS Ethylene responsive element binding protein signature 106 126 IPR001471 GO:0003700|GO:0006355
Alju12g0459 222 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
Alju12g0459 222 MobiDBLite consensus disorder prediction 17 34 - -
Alju12g0459 222 MobiDBLite consensus disorder prediction 35 59 - -
Alju12g0459 222 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 39 193 - -
Alju12g0459 222 Gene3D AP2/ERF domain 67 125 IPR036955 GO:0003700|GO:0006355
Alju12g0459 222 MobiDBLite consensus disorder prediction 152 175 - -
Alju12g0459 222 SUPERFAMILY DNA-binding domain 67 125 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0459 Alju-ChrAlju12 5758147 5758815 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0459 49 222 AP2-EREBP Transcription Factor Family AT2G44940 42.791 5.99e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju12g0459 AP2 2.2e-08 CL0081