Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0457 ATGGAAGCAGAACAACAAGAACCAGAAGCTCTCCTTCACACTCAACTTCAACCCACCACTCCCTCTTCTTTATCATCTTCTTCTTCTTCCTCCAGCACCGAAGCTCAAGAAGTTCATCACAAAGAAGAGAAGGTGAAGAAGAAGAATATTATGAAGAAGACCAGCCGTAACAAGAACACAGACATGGTGGACGGGAACCATCCAACGTACAGAGGGGTACGTATGCGTCAATGGGGCAAATGGGTTTCAGAAATCAGGGAACCCAGAAAGAAATCCAGAATATGGCTCGGAACTTTTCCTACTGCGGAAATGGCCGCTCGAGCTCACGATGTCGCTGCCCTCAGCATTAAAGGCACCTCCGCTTTCCTCAACTTCCCGGAGCTCGCCACCGTGCTTCCTCGTCCGGCCAGTAACTCCCCAAAGGACGTCCAAGCCGCCGCCGCCAAAGCAGCTACCATCAATTACCACATCAACCGTCAAGGACGACCCGAACCCGATTCCCAGGTCATGCAAGCCGACGCTCCGGCACTGTCAAGTTCGCCGTCAACAGACGACGATGACACCTTCTTCAACCTCCCTGATATCTTAAATCATGGTGGCGCCGACGAGTTTCATTACTCCTCCTTGTGGTTCTTAGCCGGCGCCGATTTCAGAGACTCAGGTTTCCGGCTCGAAGAGCCATTTCTATGGGACTCTTATTAG 702 0.5157 MEAEQQEPEALLHTQLQPTTPSSLSSSSSSSSTEAQEVHHKEEKVKKKNIMKKTSRNKNTDMVDGNHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGTSAFLNFPELATVLPRPASNSPKDVQAAAAKAATINYHINRQGRPEPDSQVMQADAPALSSSPSTDDDDTFFNLPDILNHGGADEFHYSSLWFLAGADFRDSGFRLEEPFLWDSY 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0457 233 MobiDBLite consensus disorder prediction 1 69 - -
Alju12g0457 233 Gene3D AP2/ERF domain 69 127 IPR036955 GO:0003700|GO:0006355
Alju12g0457 233 ProSiteProfiles AP2/ERF domain profile. 69 126 IPR001471 GO:0003700|GO:0006355
Alju12g0457 233 MobiDBLite consensus disorder prediction 10 34 - -
Alju12g0457 233 CDD AP2 70 128 IPR001471 GO:0003700|GO:0006355
Alju12g0457 233 FunFam Ethylene-responsive transcription factor 2 69 127 - -
Alju12g0457 233 SUPERFAMILY DNA-binding domain 69 127 IPR016177 GO:0003677
Alju12g0457 233 SMART rav1_2 69 132 IPR001471 GO:0003700|GO:0006355
Alju12g0457 233 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 42 197 - -
Alju12g0457 233 Pfam AP2 domain 68 118 IPR001471 GO:0003700|GO:0006355
Alju12g0457 233 PRINTS Ethylene responsive element binding protein signature 92 108 IPR001471 GO:0003700|GO:0006355
Alju12g0457 233 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Alju12g0457 233 MobiDBLite consensus disorder prediction 159 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0457 Alju-ChrAlju12 5696760 5697461 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0457 67 229 AP2-EREBP Transcription Factor Family AT2G44940 52.261 9.84e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju12g0457 AP2 1.6e-13 CL0081